RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SH3BGRL3Q9H299 93 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 MTIF3Q9H2K0 278 aaKnown RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ZNF703Q9H7S9 590 aaPredicted RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 TM7SF3Q9NS93 570 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 RXFP3Q9NSD7 469 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 C5AR2Q9P296 337 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 LRP12Q9Y561 859 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 IER3IP1Q9Y5U9 82 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 COL4A2P08572 1712 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ADAMTS20P59510 1910 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 MDC1Q14676 2089 aaKnown RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 NINQ8N4C6 2090 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 SAA2-SAA4A0A096LPE2 208 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 IGHV2-26A0A0B4J1V2 119 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ARL5CA6NH57 179 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 J3QR06 171 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 FGF17O60258 216 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 PITX3O75364 302 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 VAMP5O95183 116 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ONECUT2O95948 504 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 SCGB1D1O95968 90 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 PDGFBP01127 241 aaPredicted RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ISG15P05161 165 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 DBIP07108 87 aaKnown RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 CTSDP07339 412 aaPredicted RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 CD55P08174 381 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 FOSL2P15408 326 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 CSNK2A2P19784 350 aaPredicted RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 SERPINA2P20848 420 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 MDKP21741 143 aaPredicted RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ATP6V0CP27449 155 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 OTX1P32242 354 aaPredicted RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 CEACAM3P40198 252 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ACAA2P42765 397 aaKnown RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 CDKN2AP42771 156 aaKnown RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 CNN1P51911 297 aaKnown RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 NCBP2P52298 156 aaKnown RBP eCLIP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 SLC16A1P53985 500 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 UCP3P55916 312 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 NHLH1Q02575 133 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 RBPJQ06330 500 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 TAF10Q12962 218 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 MMDQ15546 238 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 SLC9A3R2Q15599 337 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 IAH1Q2TAA2 248 aaPredicted RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 C10orf120Q5SQS8 335 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 FHL5Q5TD97 284 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 C1QL3Q5VWW1 255 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 DENND4CQ5VZ89 1909 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ZNF880Q6PDB4 577 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 PLXDC2Q6UX71 529 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ZNF793Q6ZN11 406 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 LCNL1Q6ZST4 164 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ZNF627Q7L945 461 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 FAM220AQ7Z4H9 259 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ODF3L1Q8IXM7 274 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 C1orf174Q8IYL3 243 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 FBXL14Q8N1E6 418 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 BATF2Q8N1L9 274 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 CSNK1A1LQ8N752 337 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ZIC4Q8N9L1 334 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 SLC38A9Q8NBW4 561 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 OR4B1Q8NGF8 309 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 OR10S1Q8NGN2 331 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 OR6N2Q8NGY6 317 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 OR5B3Q8NH48 314 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 FAM213BQ8TBF2 198 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 GPR119Q8TDV5 335 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 GLYATL1Q969I3 302 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 TOMM40LQ969M1 308 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 FAM46BQ96A09 425 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ABHD14BQ96IU4 210 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 C18orf12Q96KH6 178 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 LMLNQ96KR4 655 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 C16orf92Q96LL3 132 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 C1orf147Q96MC9 270 aaPredicted RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 UHRF2Q96PU4 802 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 SDF2Q99470 211 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 SMAD5Q99717 465 aaKnown RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 AIF1LQ9BQI0 150 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ABHD6Q9BV23 337 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ELOVL1Q9BW60 279 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 ZNF430Q9H8G1 570 aaPredicted RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 LANCL2Q9NS86 450 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 WSB2Q9NYS7 404 aaPredicted RBP4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 LRIT1Q9P2V4 623 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 UQCR10Q9UDW1 63 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 PSG11Q9UQ72 335 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 B3GALT5Q9Y2C3 310 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 LAMTOR2Q9Y2Q5 125 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 WIPI2Q9Y4P8 454 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 LIPGQ9Y5X9 500 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 PXMP4Q9Y6I8 212 aa4.59□□□□□ -1.67
LSM3P2-201ENST00000551246 A0A0A6YYD4 124 aa4.58□□□□□ -1.68
LSM3P2-201ENST00000551246 IGHV1-69-2A0A0G2JMI3 117 aa4.58□□□□□ -1.68
LSM3P2-201ENST00000551246 A0A1B0GWA3 101 aa4.58□□□□□ -1.68
LSM3P2-201ENST00000551246 IGLC7A0M8Q6 106 aa4.58□□□□□ -1.68
LSM3P2-201ENST00000551246 MAP1LC3B2A6NCE7 125 aa4.58□□□□□ -1.68
LSM3P2-201ENST00000551246 CRYM-AS1A6NIL9 109 aa4.58□□□□□ -1.68
LSM3P2-201ENST00000551246 LIPT2A6NK58 231 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms