RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 HSPE1-MOB4S4R3N1 261 aa11.58□□□□□ -0.56
RTN3-214ENST00000545432 PRR32B1ATL7 298 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 MGST3O14880 152 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 ARPC2O15144 300 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 IGHA1P01876 353 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 FAM106CPP0CH98 169 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 SLC2A5P22732 501 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 CEACAM3P40198 252 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 SNAPC1Q16533 368 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 CCDC144NLQ6NUI1 221 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 ASRGL1Q7L266 308 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 ZNF679Q8IYX0 411 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 BATF2Q8N1L9 274 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 TPRX1Q8N7U7 411 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 C5orf56Q8N8D9 126 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 OR5M8Q8NGP6 311 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 CEP19Q96LK0 163 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 DCLRE1BQ9H816 532 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 GPR173Q9NS66 373 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 TAS2R3Q9NYW6 316 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 SMAD5-AS1Q9Y6J3 95 aa11.57□□□□□ -0.56
RTN3-214ENST00000545432 IGKV1-27A0A075B6S5 117 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 NUDT19A8MXV4 375 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 PRR23D1E9PI22 279 aaPredicted RBP11.56□□□□□ -0.56
RTN3-214ENST00000545432 PRR23D2P0DMB1 279 aaPredicted RBP11.56□□□□□ -0.56
RTN3-214ENST00000545432 PRDX6P30041 224 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 ECI1P42126 302 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 CDX1P47902 265 aaPredicted RBP11.56□□□□□ -0.56
RTN3-214ENST00000545432 P2RX3P56373 397 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 ESRRGP62508 458 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 ZNF91Q05481 1191 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 FHL3Q13643 280 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 ZNF146Q15072 292 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 C9orf152Q5JTZ5 239 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 ELMOD2Q8IZ81 293 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 OR8U1Q8NH10 309 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 CMTM5Q96DZ9 223 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 DUX3Q96PT4 197 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 NIPSNAP1Q9BPW8 284 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 MROQ9BYG7 248 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 CCDC134Q9H6E4 229 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 TAS2R1Q9NYW7 299 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 LAMP5Q9UJQ1 280 aa11.56□□□□□ -0.56
RTN3-214ENST00000545432 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.56□□□□□ -0.56
RTN3-214ENST00000545432 ZNF256Q9Y2P7 627 aaPredicted RBP11.56□□□□□ -0.56
RTN3-214ENST00000545432 HAND1O96004 215 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 CCL1P22362 96 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 CDK2P24941 298 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 GDNFP39905 211 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 MNDAP41218 407 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 HCCSP53701 268 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 SLC35B1P78383 322 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 PPP1R8Q12972 351 aaKnown RBP11.55□□□□□ -0.56
RTN3-214ENST00000545432 EDDM3AQ14507 147 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 GRK1Q15835 563 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 SLX4IPQ5VYV7 408 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 TEX38Q6PEX7 206 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 ENTHD1Q8IYW4 607 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 STPG2Q8N412 459 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 IQCF1Q8N6M8 205 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 ZNF286AQ9HBT8 521 aa11.55□□□□□ -0.56
RTN3-214ENST00000545432 SIRT4Q9Y6E7 314 aaPredicted RBP11.55□□□□□ -0.56
RTN3-214ENST00000545432 CCRL2O00421 344 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 OR3A1P47881 315 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 INSL3P51460 131 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 MFGE8Q08431 387 aaPredicted RBP11.54□□□□□ -0.56
RTN3-214ENST00000545432 EBI3Q14213 229 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 GK3PQ14409 553 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 ZNF829Q3KNS6 432 aaPredicted RBP11.54□□□□□ -0.56
RTN3-214ENST00000545432 SPATS1Q496A3 300 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 PRAMEF5Q5TYX0 476 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 CPOQ8IVL8 374 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 TEX47Q8TBZ9 253 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 ASB17Q8WXJ9 295 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 OTULINQ96BN8 352 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 CADM1Q9BY67 442 aaKnown RBP11.54□□□□□ -0.56
RTN3-214ENST00000545432 GAL3ST2Q9H3Q3 398 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 MOB1AQ9H8S9 216 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 PCDHB16Q9NRJ7 776 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 KIAA2026Q5HYC2 2103 aa11.54□□□□□ -0.56
RTN3-214ENST00000545432 SERPINE3A8MV23 424 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 SEC14L6B5MCN3 397 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 RPLP1P05386 114 aaKnown RBP11.53□□□□□ -0.56
RTN3-214ENST00000545432 CGB3P0DN86 165 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 CGB7P0DN87 165 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 RIDAP52758 137 aaKnown RBP11.53□□□□□ -0.56
RTN3-214ENST00000545432 PRRX1P54821 245 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 CDC42P60953 191 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 CDK5Q00535 292 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 UBE2V2Q15819 145 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 PNLIPRP3Q17RR3 467 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 UTF1Q5T230 341 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 COMMD2Q86X83 199 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 Q8IYB0 196 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 DRAM1Q8N682 238 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 CDRT15Q96T59 188 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 CHST6Q9GZX3 395 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 EDA2RQ9HAV5 297 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 IL36RNQ9UBH0 155 aa11.53□□□□□ -0.56
RTN3-214ENST00000545432 COPS3Q9UNS2 423 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms