RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 ACTG2P63267 376 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 IL18R1Q13478 541 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 MEDAGQ5VYS4 303 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 UTS2BQ765I0 119 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 LHFPL4Q7Z7J7 247 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 FAM58AQ8N1B3 248 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 PRSS35Q8N3Z0 413 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 ZNF676Q8N7Q3 588 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 CFHR4Q92496 578 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 SIGLEC9Q9Y336 463 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 SESN1Q9Y6P5 492 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 DAPL1A0PJW8 107 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 SAC3D1A6NKF1 404 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 F8VVB4 439 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 F8VWA3 439 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 MGST3O14880 152 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 SLC16A6O15403 523 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 INMTO95050 263 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 OPN1MWP04001 364 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 OPN1MW2P0DN77 364 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 OPN1MW3P0DN78 364 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 AZGP1P25311 298 aaKnown RBP10.61□□□□□ -0.71
RTN3-213ENST00000543552 PAX6P26367 422 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 POLR2IP36954 125 aaKnown RBP10.61□□□□□ -0.71
RTN3-213ENST00000543552 POU3F4P49335 361 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 ZNF91Q05481 1191 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 ZNF146Q15072 292 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 SSX2Q16385 188 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 TP53I3Q53FA7 332 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 PLA1AQ53H76 456 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 ARSJQ5FYB0 599 aaPredicted RBP10.61□□□□□ -0.71
RTN3-213ENST00000543552 TRAPPC6BQ86SZ2 158 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 OR4S1Q8NGB4 309 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 OR2G2Q8NGZ5 317 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 NDNFQ8TB73 568 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 PIFOQ8TCI5 191 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 PRSS22Q9GZN4 317 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 GAL3ST2Q9H3Q3 398 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 RHOFQ9HBH0 211 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 HHLA2Q9UM44 414 aa10.61□□□□□ -0.71
RTN3-213ENST00000543552 UBE2J1Q9Y385 318 aaPredicted RBP10.61□□□□□ -0.71
RTN3-213ENST00000543552 TMEM82A0PJX8 343 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 SH2D1BO14796 132 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 RRP9O43818 475 aaKnown RBP10.6□□□□□ -0.71
RTN3-213ENST00000543552 FBXO24O75426 580 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 HTR1AP08908 422 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 PRKACAP17612 351 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 ATF1P18846 271 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 ERP29P30040 261 aaKnown RBP10.6□□□□□ -0.71
RTN3-213ENST00000543552 KIR3DL2P43630 455 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 CCR9P51686 369 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 P2RX3P56373 397 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 ZNF85Q03923 595 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 SLC25A30Q5SVS4 291 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 OR52W1Q6IF63 320 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 FDX2Q6P4F2 183 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 Q8N2B8 174 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 ACBD7Q8N6N7 88 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 CAPSLQ8WWF8 208 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 FGGYQ96C11 551 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 RNFT2Q96EX2 444 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 ADAT3Q96EY9 351 aaPredicted RBP10.6□□□□□ -0.71
RTN3-213ENST00000543552 AKR1E2Q96JD6 320 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 HRASLS5Q96KN8 279 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 OPALINQ96PE5 141 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 MBOAT4Q96T53 435 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 CLEC7AQ9BXN2 247 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 CHST6Q9GZX3 395 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 TMEM133Q9H2Q1 129 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 ZNF702PQ9H963 129 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 EXOSC4Q9NPD3 245 aaKnown RBP10.6□□□□□ -0.71
RTN3-213ENST00000543552 RBFOX1Q9NWB1 397 aaKnown RBP10.6□□□□□ -0.71
RTN3-213ENST00000543552 FOXJ3Q9UPW0 622 aa10.6□□□□□ -0.71
RTN3-213ENST00000543552 TRGV10A0A0A0MS01 117 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 IGHV2-26A0A0B4J1V2 119 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 A6NDX4 124 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 ENTPD6O75354 484 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 IGHA1P01876 353 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 ALPLP05186 524 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 BCL3P20749 454 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 HTR1DP28221 377 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 SNRPGP62308 76 aaKnown RBP10.59□□□□□ -0.71
RTN3-213ENST00000543552 EMX1Q04741 257 aaPredicted RBP10.59□□□□□ -0.71
RTN3-213ENST00000543552 SLC34A1Q06495 639 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 PDZK1IP1Q13113 114 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 ZFP1Q6P2D0 407 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 TMEM219Q86XT9 240 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 C1QL4Q86Z23 238 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 C10orf67Q8IYJ2 551 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 RDH10Q8IZV5 341 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 C11orf44Q8N8P7 122 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 OR13C3Q8NGS6 347 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 CPNE2Q96FN4 548 aaPredicted RBP10.59□□□□□ -0.71
RTN3-213ENST00000543552 HMG20AQ9NP66 347 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 FRRS1LQ9P0K9 344 aa10.59□□□□□ -0.71
RTN3-213ENST00000543552 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.59□□□□□ -0.71
RTN3-213ENST00000543552 DSCAML1Q8TD84 2053 aa10.58□□□□□ -0.72
RTN3-213ENST00000543552 IGKV1-9A0A0C4DH69 117 aa10.58□□□□□ -0.72
RTN3-213ENST00000543552 MEX3AA1L020 520 aaKnown RBP10.58□□□□□ -0.72
RTN3-213ENST00000543552 MEGF11A6BM72 1044 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms