RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 SCRT1Q9BWW7 348 aa5.05□□□□□ -1.6
XRCC4-206ENST00000542685 RAB33BQ9H082 229 aa5.05□□□□□ -1.6
XRCC4-206ENST00000542685 TCEAL2Q9H3H9 227 aaPredicted RBP5.05□□□□□ -1.6
XRCC4-206ENST00000542685 RERGLQ9H628 205 aa5.05□□□□□ -1.6
XRCC4-206ENST00000542685 TAF9BQ9HBM6 251 aa5.05□□□□□ -1.6
XRCC4-206ENST00000542685 MRPL22Q9NWU5 206 aaKnown RBP5.05□□□□□ -1.6
XRCC4-206ENST00000542685 BET1LQ9NYM9 111 aa5.05□□□□□ -1.6
XRCC4-206ENST00000542685 TVP23BQ9NYZ1 205 aa5.05□□□□□ -1.6
XRCC4-206ENST00000542685 VPS29Q9UBQ0 182 aa5.05□□□□□ -1.6
XRCC4-206ENST00000542685 UQCR10Q9UDW1 63 aa5.05□□□□□ -1.6
XRCC4-206ENST00000542685 CD84Q9UIB8 345 aa5.05□□□□□ -1.6
XRCC4-206ENST00000542685 CLEC4EQ9ULY5 219 aa5.05□□□□□ -1.6
XRCC4-206ENST00000542685 NOP16Q9Y3C1 178 aaKnown RBP5.05□□□□□ -1.6
XRCC4-206ENST00000542685 MRPS16Q9Y3D3 137 aaKnown RBP5.05□□□□□ -1.6
XRCC4-206ENST00000542685 Q9Y3F1 56 aa5.05□□□□□ -1.6
XRCC4-206ENST00000542685 SCN10AQ9Y5Y9 1956 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 LOC100509620A0A075B734 347 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 IGHV1-69-2A0A0G2JMI3 117 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 A0A0G2JN53 185 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 ANKRD66B4E2M5 251 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 CORTO00230 105 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 CCL22O00626 93 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 NME6O75414 186 aaPredicted RBP5.04□□□□□ -1.6
XRCC4-206ENST00000542685 SCGNO76038 276 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 OR6A2O95222 327 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 HSPB1P04792 205 aaKnown RBP5.04□□□□□ -1.6
XRCC4-206ENST00000542685 CSN2P05814 226 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 ANXA4P09525 319 aaPredicted RBP5.04□□□□□ -1.6
XRCC4-206ENST00000542685 CD37P11049 281 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 EPORP19235 508 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 MT3P25713 68 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 DPP4P27487 766 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 PPOXP50336 477 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 LBX1P52954 281 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 ATP1B3P54709 279 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 TAS2R20P59543 309 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 DHRS2Q13268 280 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 CRMP1Q14194 572 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 TGIF1Q15583 401 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 HYAL4Q2M3T9 481 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 LRRC73Q5JTD7 316 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 PIP5KL1Q5T9C9 394 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 DMKNQ6E0U4 476 aaPredicted RBP5.04□□□□□ -1.6
XRCC4-206ENST00000542685 FBXL22Q6P050 247 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 TMEM205Q6UW68 189 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 UNQ6126/PRO20091Q6UXV3 157 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 FRRS1Q6ZNA5 592 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 TMPPEQ6ZT21 453 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 TMED4Q7Z7H5 227 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 VASH2Q86V25 355 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 SLC25A42Q86VD7 318 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 GKN2Q86XP6 184 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 NRMQ8IXM6 262 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 KLHDC1Q8N7A1 406 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 BMPERQ8N8U9 685 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 OR10W1Q8NGF6 305 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 OR51L1Q8NGJ5 315 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 OR52M1Q8NGK5 317 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 OR10Q1Q8NGQ4 319 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 OR13C5Q8NGS8 318 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 APOBEC4Q8WW27 367 aaKnown RBP5.04□□□□□ -1.6
XRCC4-206ENST00000542685 ADIPOR1Q96A54 375 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 MRGPRFQ96AM1 343 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 SPSB1Q96BD6 273 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 REEP6Q96HR9 211 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 CIB3Q96Q77 187 aaPredicted RBP5.04□□□□□ -1.6
XRCC4-206ENST00000542685 VAMP8Q9BV40 100 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 SLC5A7Q9GZV3 580 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 FBXW2Q9UKT8 454 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 TBX21Q9UL17 535 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 DAPP1Q9UN19 280 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 MRPS18BQ9Y676 258 aaKnown RBP5.04□□□□□ -1.6
XRCC4-206ENST00000542685 PLXNA2O75051 1894 aa5.04□□□□□ -1.6
XRCC4-206ENST00000542685 TCF20Q9UGU0 1960 aaKnown RBP5.04□□□□□ -1.6
XRCC4-206ENST00000542685 NUP210LQ5VU65 1888 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 IGLV3-16A0A075B6K0 115 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 BORCS7-ASMTA0A0B4J1R7 106 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 NPIPA5A0A0B4J1W7 369 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.03□□□□□ -1.6
XRCC4-206ENST00000542685 TRBC2A0A5B9 178 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 ANKUB1A6NFN9 424 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 OR5B21A6NL26 309 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 IFITM5A6NNB3 132 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 LOC730098B7Z3J9 87 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 C9JQL5 133 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 NPIPA5E9PKD4 350 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 NPIPA3F8WFD2 350 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 XKRYO14609 159 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 NME2P1O60361 137 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 TBX19O60806 448 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 LRP3O75074 770 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 GCM2O75603 506 aaPredicted RBP5.03□□□□□ -1.6
XRCC4-206ENST00000542685 B3GAT3O94766 335 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 PPP1R3DO95685 299 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 HLA-DQA2P01906 255 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 LIPFP07098 398 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 CXCL1P09341 107 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 OR4A8P0C604 315 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 DANCRP0C864 163 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 STAG3L2P0CL84 134 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms