RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 ISG15P05161 165 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 RPSAP08865 295 aaKnown RBP10.62□□□□□ -0.71
RTN3-207ENST00000536011 VSIG10L2P0DP72 767 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 DYNLT3P51808 116 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 ARHGDIBP52566 201 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 MTCP1P56278 107 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 ISL1P61371 349 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 ACTA2P62736 377 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 ACTG2P63267 376 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 IL18R1Q13478 541 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 MEDAGQ5VYS4 303 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 UTS2BQ765I0 119 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 LHFPL4Q7Z7J7 247 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 FAM58AQ8N1B3 248 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 PRSS35Q8N3Z0 413 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 ZNF676Q8N7Q3 588 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 CFHR4Q92496 578 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 SIGLEC9Q9Y336 463 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 SESN1Q9Y6P5 492 aa10.62□□□□□ -0.71
RTN3-207ENST00000536011 DAPL1A0PJW8 107 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 SAC3D1A6NKF1 404 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 F8VVB4 439 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 F8VWA3 439 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 MGST3O14880 152 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 SLC16A6O15403 523 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 INMTO95050 263 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 OPN1MWP04001 364 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 OPN1MW2P0DN77 364 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 OPN1MW3P0DN78 364 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 AZGP1P25311 298 aaKnown RBP10.61□□□□□ -0.71
RTN3-207ENST00000536011 PAX6P26367 422 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 POLR2IP36954 125 aaKnown RBP10.61□□□□□ -0.71
RTN3-207ENST00000536011 POU3F4P49335 361 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 ZNF91Q05481 1191 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 ZNF146Q15072 292 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 SSX2Q16385 188 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 TP53I3Q53FA7 332 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 PLA1AQ53H76 456 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 ARSJQ5FYB0 599 aaPredicted RBP10.61□□□□□ -0.71
RTN3-207ENST00000536011 TRAPPC6BQ86SZ2 158 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 OR4S1Q8NGB4 309 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 OR2G2Q8NGZ5 317 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 NDNFQ8TB73 568 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 PIFOQ8TCI5 191 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 PRSS22Q9GZN4 317 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 GAL3ST2Q9H3Q3 398 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 RHOFQ9HBH0 211 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 HHLA2Q9UM44 414 aa10.61□□□□□ -0.71
RTN3-207ENST00000536011 UBE2J1Q9Y385 318 aaPredicted RBP10.61□□□□□ -0.71
RTN3-207ENST00000536011 TMEM82A0PJX8 343 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 SH2D1BO14796 132 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 FBXO24O75426 580 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 HTR1AP08908 422 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 PRKACAP17612 351 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 ATF1P18846 271 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 ERP29P30040 261 aaKnown RBP10.6□□□□□ -0.71
RTN3-207ENST00000536011 KIR3DL2P43630 455 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 CCR9P51686 369 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 P2RX3P56373 397 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 ZNF85Q03923 595 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 SLC25A30Q5SVS4 291 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 OR52W1Q6IF63 320 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 FDX2Q6P4F2 183 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 Q8N2B8 174 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 ACBD7Q8N6N7 88 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 CAPSLQ8WWF8 208 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 FGGYQ96C11 551 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 RNFT2Q96EX2 444 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 ADAT3Q96EY9 351 aaPredicted RBP10.6□□□□□ -0.71
RTN3-207ENST00000536011 AKR1E2Q96JD6 320 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 HRASLS5Q96KN8 279 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 OPALINQ96PE5 141 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 MBOAT4Q96T53 435 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 CLEC7AQ9BXN2 247 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 CHST6Q9GZX3 395 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 TMEM133Q9H2Q1 129 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 ZNF702PQ9H963 129 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 EXOSC4Q9NPD3 245 aaKnown RBP10.6□□□□□ -0.71
RTN3-207ENST00000536011 RBFOX1Q9NWB1 397 aaKnown RBP10.6□□□□□ -0.71
RTN3-207ENST00000536011 FOXJ3Q9UPW0 622 aa10.6□□□□□ -0.71
RTN3-207ENST00000536011 TRGV10A0A0A0MS01 117 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 IGHV2-26A0A0B4J1V2 119 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 A6NDX4 124 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 LCE2BO14633 110 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 ENTPD6O75354 484 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 IGHA1P01876 353 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 ALPLP05186 524 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 BCL3P20749 454 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 HTR1DP28221 377 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 SNRPGP62308 76 aaKnown RBP10.59□□□□□ -0.71
RTN3-207ENST00000536011 EMX1Q04741 257 aaPredicted RBP10.59□□□□□ -0.71
RTN3-207ENST00000536011 SLC34A1Q06495 639 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 PDZK1IP1Q13113 114 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 ZFP1Q6P2D0 407 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 TMEM219Q86XT9 240 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 C1QL4Q86Z23 238 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 C10orf67Q8IYJ2 551 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 RDH10Q8IZV5 341 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 C11orf44Q8N8P7 122 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 OR13C3Q8NGS6 347 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms