RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	POU6F1	Q14863	301 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	OR2B11	Q5JQS5	317 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	SOHLH1	Q5JUK2	328 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	UTF1	Q5T230	341 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	CCDC137	Q6PK04	289 aa	Known RBP	3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	AGTRAP	Q6RW13	159 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	BZW1	Q7L1Q6	419 aa	Known RBP	3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	TRPM8	Q7Z2W7	1104 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	CCDC50	Q8IVM0	306 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442		Q8N2B8	174 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	MTURN	Q8N3F0	131 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	TTL	Q8NG68	377 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	OR1L4	Q8NGR5	311 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	DEFB104A	Q8WTQ1	72 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	UBE2E3	Q969T4	207 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	APH1A	Q96BI3	265 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	C10orf35	Q96D05	121 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	SLC25A38	Q96DW6	304 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	SRXN1	Q9BYN0	137 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	MRPL37	Q9BZE1	423 aa	Known RBP	3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	ROPN1B	Q9BZX4	212 aa	Predicted RBP	3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	ROGDI	Q9GZN7	287 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	GBA3	Q9H227	469 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	RPF2	Q9H7B2	306 aa	Known RBP	3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	TMEM185B	Q9H7F4	350 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	CXorf21	Q9HAI6	301 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	NANS	Q9NR45	359 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	MS4A12	Q9NXJ0	267 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	ZNF639	Q9UID6	485 aa		3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	ZNF107	Q9UII5	783 aa	Predicted RBP	3.16	□□□□□ -1.9
ECHDC1-223	ENST00000534442	FAM240B	A0A1B0GVZ2	78 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442		E7ESA3	106 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442		H0Y8G0	127 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	RGS16	O15492	202 aa	Predicted RBP	3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ATP5L	O75964	103 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IFNA14	P01570	189 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	SLC35E2B	P0CK96	405 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZP3	P21754	424 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	EVI2B	P34910	448 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	RAB25	P57735	213 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	DSCR10	P59022	87 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	FGF12	P61328	243 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	MRPS22	P82650	360 aa	Known RBP	3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PRPSAP1	Q14558	356 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	AANAT	Q16613	207 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	C9orf135	Q5VTT2	229 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	METTL11B	Q5VVY1	283 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	SKA3	Q8IX90	412 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	SPIC	Q8N5J4	248 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PRELID2	Q8N945	189 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ACOT4	Q8N9L9	421 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	OR51D1	Q8NGF3	324 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	TCTEX1D2	Q8WW35	142 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	MAIP1	Q8WWC4	291 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZNF75CP	Q92670	426 aa	Predicted RBP	3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	MYDGF	Q969H8	173 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	NEIL2	Q969S2	332 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	TMBIM1	Q969X1	311 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PPP1R2P1	Q96PQ5	205 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	OR4K3	Q96R72	315 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZNF702P	Q9H963	129 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PATZ1	Q9HBE1	687 aa	Known RBP	3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	LYAR	Q9NX58	379 aa	Known RBP	3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	EMC3	Q9P0I2	261 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZNRD1	Q9P1U0	126 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CFAP45	Q9UL16	551 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PLLP	Q9Y342	182 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	FLVCR1	Q9Y5Y0	555 aa		3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	MACF1	Q9UPN3	7388 aa	Known RBP	3.15	□□□□□ -1.91
ECHDC1-223	ENST00000534442	TNC	P24821	2201 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CENPVL3	A0A0U1RRI6	287 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	KIR2DS1	A0A191URI9	304 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	GJE1	A6NN92	205 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	SEC14L6	B5MCN3	397 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	LALBA	P00709	142 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CT62	P0C5K7	136 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	MPC1L	P0DKB6	136 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	NCF2	P19878	526 aa	Predicted RBP	3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	KDELR1	P24390	212 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IL12B	P29460	328 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PPIC	P45877	212 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	DYNLT1	P63172	113 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PSPH	P78330	225 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IL5RA	Q01344	420 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	STX5	Q13190	355 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	MAD2L1BP	Q15013	274 aa	Predicted RBP	3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	LRRC36	Q1X8D7	754 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PLPPR5	Q32ZL2	321 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	TTLL9	Q3SXZ7	439 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CTSL3P	Q5NE16	218 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CPTP	Q5TA50	214 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZNF774	Q6NX45	483 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	C6orf89	Q6UWU4	347 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	MBOAT1	Q6ZNC8	495 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	FRA10AC1	Q70Z53	315 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CADM2	Q8N3J6	435 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	OR56B2P	Q8NGI1	322 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	AKR7L	Q8NHP1	331 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	MAGEE2	Q8TD90	523 aa	Predicted RBP	3.14	□□□□□ -1.91

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