RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 BLVRBP30043 206 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-228ENST00000531007 RCVRNP35243 200 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 ERVK11-1P61568 191 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 MRPS15P82914 257 aaKnown RBP8.36□□□□□ -1.07
CTNND1-228ENST00000531007 PLA2G7Q13093 441 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 MAB21L1Q13394 359 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 RBM39Q14498 530 aaKnown RBP8.36□□□□□ -1.07
CTNND1-228ENST00000531007 OXA1LQ15070 435 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 TRIM16LQ309B1 348 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 ALKBH6Q3KRA9 238 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 ZNF672Q499Z4 452 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-228ENST00000531007 ACTBL2Q562R1 376 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 ZNF57Q68EA5 555 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-228ENST00000531007 RNF144BQ7Z419 303 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 FAM58AQ8N1B3 248 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 FBXL14Q8N1E6 418 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 OR2Z1Q8NG97 314 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 GTF3AQ92664 365 aaKnown RBP8.36□□□□□ -1.07
CTNND1-228ENST00000531007 SEH1LQ96EE3 360 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 SYT3Q9BQG1 590 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 NRIP2Q9BQI9 281 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 CHST6Q9GZX3 395 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 RIMS4Q9H426 269 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-228ENST00000531007 PLEKHJ1Q9NW61 149 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 RBFOX1Q9NWB1 397 aaKnown RBP8.36□□□□□ -1.07
CTNND1-228ENST00000531007 MTCH1Q9NZJ7 389 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 CRIM1Q9NZV1 1036 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 FZR1Q9UM11 496 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 EDARQ9UNE0 448 aa8.36□□□□□ -1.07
CTNND1-228ENST00000531007 ANKRD20A5PA0PJZ0 165 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 ZSCAN5BA6NJL1 495 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 C17orf100A8MU93 164 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 DEFB108AA8MXU0 73 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 E7EQL1 145 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 F5H5P2 479 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 SOCS1O15524 211 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 PDCD6O75340 191 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 PLATP00750 562 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 GRPP07492 148 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 SFTPBP07988 381 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 BCL3P20749 454 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 DTYMKP23919 212 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 GDNFP39905 211 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 TMEM50BP56557 158 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 TAS2R19P59542 299 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 GNG2P59768 71 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 TNFAIP6P98066 277 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-228ENST00000531007 DGCR2P98153 550 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 ZNF146Q15072 292 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 CDSNQ15517 529 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 SRSF7Q16629 238 aaKnown RBP eCLIP8.35□□□□□ -1.07
CTNND1-228ENST00000531007 SMIM21Q3B7S5 101 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 TMEM255AQ5JRV8 349 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 SHEQ5VZ18 495 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 WDR86Q86TI4 376 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 BIVMQ86UB2 503 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 LRP11Q86VZ4 500 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 IZUMO1Q8IYV9 350 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 TMEM229BQ8NBD8 167 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 OR10K1Q8NGX5 313 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 OR52I2Q8NH67 350 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 Q8TCH9 128 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 ST8SIA4Q92187 359 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 EMG1Q92979 244 aaKnown RBP8.35□□□□□ -1.07
CTNND1-228ENST00000531007 SLAMF9Q96A28 289 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 NKX3-1Q99801 234 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-228ENST00000531007 PECRQ9BY49 303 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 KCNK15Q9H427 330 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 HES4Q9HCC6 221 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 MSL2Q9HCI7 577 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 CISD1Q9NZ45 108 aaKnown RBP8.35□□□□□ -1.07
CTNND1-228ENST00000531007 TREM2Q9NZC2 230 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 RCC2Q9P258 522 aaKnown RBP8.35□□□□□ -1.07
CTNND1-228ENST00000531007 MYEF2Q9P2K5 600 aaKnown RBP8.35□□□□□ -1.07
CTNND1-228ENST00000531007 NPTNQ9Y639 398 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 FLNCQ14315 2725 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 PCNX1Q96RV3 2341 aa8.35□□□□□ -1.07
CTNND1-228ENST00000531007 HCFC1P51610 2035 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 A0A0A6YYD4 124 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 A0A1W2PP11 408 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 A6NLC8 198 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 LRRC30A6NM36 301 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 H0YL77 283 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 SH2D1BO14796 132 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 GEMIN2O14893 280 aaKnown RBP8.34□□□□□ -1.07
CTNND1-228ENST00000531007 LYRM1O43325 122 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 SYNGR1O43759 233 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 NXPH2O95156 264 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 KNG1P01042 644 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 IGHV1-46P01743 117 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 CD3GP09693 182 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 IRF2P14316 349 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 PRKACAP17612 351 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 NAT1P18440 290 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 GABRR1P24046 479 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 LOXP28300 417 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-228ENST00000531007 CHATP28329 748 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 MDH2P40926 338 aaKnown RBP8.34□□□□□ -1.07
CTNND1-228ENST00000531007 NPBWR2P48146 333 aa8.34□□□□□ -1.07
CTNND1-228ENST00000531007 KCNJ3P48549 501 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms