RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 GTF2H5Q6ZYL4 71 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 PARS2Q7L3T8 475 aaKnown RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 RD3Q7Z3Z2 195 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 RTN4RL1Q86UN2 441 aaPredicted RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 HOGA1Q86XE5 327 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 SLC35F2Q8IXU6 374 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 CMTM8Q8IZV2 173 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 SLC39A11Q8N1S5 342 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 TMEM217Q8N7C4 229 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 FER1L6-AS1Q8NA97 138 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 ADAD2Q8NCV1 583 aaKnown RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 OR5AU1Q8NGC0 362 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 OR52R1Q8NGF1 315 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 OR2T10Q8NGZ9 312 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 CLDND2Q8NHS1 167 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 RNF128Q8TEB7 428 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 TMEM37Q8WXS4 190 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 DIO2Q92813 273 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 IL22RA2Q969J5 263 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 STARD4Q96DR4 205 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 ALG14Q96F25 216 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 MRAP2Q96G30 205 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 TSPAN32Q96QS1 320 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 AGMATQ9BSE5 352 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 NICN1Q9BSH3 213 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 MED10Q9BTT4 135 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 TPSD1Q9BZJ3 242 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 PKIBQ9C010 78 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 CIPCQ9C0C6 399 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 TMEM39BQ9GZU3 492 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 PRDM14Q9GZV8 571 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 PARP12Q9H0J9 701 aaKnown RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 NKX2-4Q9H2Z4 354 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 PLEKHJ1Q9NW61 149 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 CISD1Q9NZ45 108 aaKnown RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 COPS7AQ9UBW8 275 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 ICAM5Q9UMF0 924 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 TMED7Q9Y3B3 224 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 LIPGQ9Y5X9 500 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 MGAMO43451 1857 aa5.09□□□□□ -1.6
CD44-225ENST00000527326 NPIPA5A0A0B4J1W7 369 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 SMIM28A0A1B0GU29 152 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ZC3H12DA2A288 527 aaKnown RBP5.08□□□□□ -1.6
CD44-225ENST00000527326 ARL5CA6NH57 179 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 NPIPA5E9PKD4 350 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 NPIPA3F8WFD2 350 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 SIRPB1O00241 398 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 HMGN4O00479 90 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 TMPRSS11DO60235 418 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 SLC25A14O95258 325 aaPredicted RBP5.08□□□□□ -1.6
CD44-225ENST00000527326 ABHD16AO95870 558 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 HLA-HP01893 362 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 REG1AP05451 166 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 C1QTNF9P0C862 333 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ZNF28P17035 718 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ADRA2CP18825 462 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 EN2P19622 333 aaPredicted RBP5.08□□□□□ -1.6
CD44-225ENST00000527326 DRD1P21728 446 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 HNRNPA2B1P22626 353 aaKnown RBP5.08□□□□□ -1.6
CD44-225ENST00000527326 AK4P27144 223 aaPredicted RBP5.08□□□□□ -1.6
CD44-225ENST00000527326 CMPK1P30085 196 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ECI1P42126 302 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 PPOXP50336 477 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ARG2P78540 354 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 CCL7P80098 99 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ZNF117Q03924 483 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 PMPCAQ10713 525 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ZNF266Q14584 549 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 IHHQ14623 411 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 MLC1Q15049 377 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 MSMO1Q15800 293 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 CCSMST1Q4G0I0 132 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ALG10Q5BKT4 473 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 FAM90A2PQ658T7 463 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ABHD17CQ6PCB6 329 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ZNF880Q6PDB4 577 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 WDR82Q6UXN9 313 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 Q7L0L9 218 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ZNF627Q7L945 461 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 C16orf82Q7Z2V1 217 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 ZNF595Q8IYB9 648 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 OR2L13Q8N349 312 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 MUC15Q8N387 334 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 DTWD2Q8NBA8 298 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 OR51G1Q8NGK1 321 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 OR1N2Q8NGR9 330 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 OR2Y1Q8NGV0 311 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 VN1R17PQ8TDU5 208 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 FAM3DQ96BQ1 224 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 FCRL2Q96LA5 508 aaPredicted RBP5.08□□□□□ -1.6
CD44-225ENST00000527326 FER1L6-AS2Q96M78 137 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 OR6C1Q96RD1 312 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 PDCD1LG2Q9BQ51 273 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 PSMG3Q9BT73 122 aaPredicted RBP5.08□□□□□ -1.6
CD44-225ENST00000527326 MRIQ9BWK5 157 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 LPAR5Q9H1C0 372 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 OR51I2Q9H344 312 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 MED20Q9H944 212 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 GPR84Q9NQS5 396 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms