RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 SSX1Q16384 188 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 TTMPQ5BVD1 217 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 TMEM215Q68D42 235 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 ZNF660Q6AZW8 331 aaPredicted RBP1.4□□□□□ -2.19
SKP1-203ENST00000517625 SMARCD3Q6STE5 483 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 PID1Q7Z2X4 250 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 TMEM144Q7Z5S9 345 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 SYS1Q8N2H4 156 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 LY6G5BQ8NDX9 201 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 BPIFB6Q8NFQ5 453 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 ZCCHC13Q8WW36 166 aaKnown RBP1.4□□□□□ -2.19
SKP1-203ENST00000517625 KIAA1143Q96AT1 154 aaPredicted RBP1.4□□□□□ -2.19
SKP1-203ENST00000517625 SRRQ9GZT4 340 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 ASB7Q9H672 318 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 VSIRQ9H7M9 311 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 RHOFQ9HBH0 211 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 TMEM38BQ9NVV0 291 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 ZNF230Q9UIE0 474 aaPredicted RBP1.4□□□□□ -2.19
SKP1-203ENST00000517625 MCTS1Q9ULC4 181 aaKnown RBP1.4□□□□□ -2.19
SKP1-203ENST00000517625 SPATA31E1Q6ZUB1 1445 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 CEP350Q5VT06 3117 aa1.4□□□□□ -2.19
SKP1-203ENST00000517625 HELZ2Q9BYK8 2649 aaKnown RBP1.39□□□□□ -2.19
SKP1-203ENST00000517625 IGHV3-43A0A0B4J1X8 118 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 K7ERS5 55 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 RFXANKO14593 260 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 SYNGR2O43760 224 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 COX7A2P2O60397 106 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 CPSF4O95639 269 aaKnown RBP1.39□□□□□ -2.19
SKP1-203ENST00000517625 CD8AP01732 235 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 HLA-AP01891 365 aaKnown RBP1.39□□□□□ -2.19
SKP1-203ENST00000517625 GZMMP51124 257 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 FOXA1P55317 472 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 FMODQ06828 376 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 NDUFAF6Q330K2 333 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 Q499Y3 187 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 CAVIN4Q5BKX8 364 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 RESP18Q5W5W9 173 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 PRNTQ86SH4 94 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 AMN1Q8IY45 258 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 OR4A15Q8NGL6 344 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 ACTL9Q8TC94 416 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 TNFRSF14Q92956 283 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 GLT1D1Q96MS3 346 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 VAT1Q99536 393 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 CHID1Q9BWS9 393 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 ANKHQ9HCJ1 492 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 SDHAF2Q9NX18 166 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 SEC16AO15027 2179 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 TSPOAP1O95153 1857 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 NRCAMQ92823 1304 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 FBN3Q75N90 2809 aa1.39□□□□□ -2.19
SKP1-203ENST00000517625 SCN4AP35499 1836 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 TRIP11Q15643 1979 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 LTBP4Q8N2S1 1624 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 IGKV1OR2-108A0A075B7D4 117 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 GYG2O15488 501 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 PSCAO43653 123 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 RLN2P04090 185 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 TAC1P20366 129 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 PTNP21246 168 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 IMPA1P29218 277 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 TTPAP49638 278 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 KLF3P57682 345 aaPredicted RBP1.38□□□□□ -2.19
SKP1-203ENST00000517625 BNIP2Q12982 314 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 ZNF141Q15928 474 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 CEACAM16Q2WEN9 425 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 PDZD11Q5EBL8 140 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 UBE2NLQ5JXB2 153 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 LIN9Q5TKA1 542 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 SLC25A25Q6KCM7 469 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 LYZL2Q7Z4W2 148 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 LINC00596Q86U02 117 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 GAPTQ8N292 157 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 ASCC1Q8N9N2 400 aaKnown RBP1.38□□□□□ -2.19
SKP1-203ENST00000517625 ACBD4Q8NC06 268 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 ZNF738Q8NE65 137 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 OR8S1Q8NH09 359 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 NXF2Q9GZY0 626 aaKnown RBP1.38□□□□□ -2.19
SKP1-203ENST00000517625 TXNIPQ9H3M7 391 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 METTL8Q9H825 291 aaKnown RBP1.38□□□□□ -2.19
SKP1-203ENST00000517625 PLEKHA1Q9HB21 404 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 ACOT13Q9NPJ3 140 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 DIABLOQ9NR28 239 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 SLC22A14Q9Y267 594 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 SETD2Q9BYW2 2564 aaPredicted RBP1.38□□□□□ -2.19
SKP1-203ENST00000517625 KIAA1671Q9BY89 1806 aa1.38□□□□□ -2.19
SKP1-203ENST00000517625 BAZ1BQ9UIG0 1483 aaKnown RBP1.37□□□□□ -2.19
SKP1-203ENST00000517625 STAB1Q9NY15 2570 aa1.37□□□□□ -2.19
SKP1-203ENST00000517625 MYBPHLA2RUH7 354 aa1.37□□□□□ -2.19
SKP1-203ENST00000517625 CSTAP01040 98 aa1.37□□□□□ -2.19
SKP1-203ENST00000517625 SCGB1C2P0DMR2 95 aa1.37□□□□□ -2.19
SKP1-203ENST00000517625 LIPCP11150 499 aa1.37□□□□□ -2.19
SKP1-203ENST00000517625 PRTN3P24158 256 aa1.37□□□□□ -2.19
SKP1-203ENST00000517625 IL12BP29460 328 aa1.37□□□□□ -2.19
SKP1-203ENST00000517625 DEKP35659 375 aaKnown RBP1.37□□□□□ -2.19
SKP1-203ENST00000517625 CCL23P55773 120 aa1.37□□□□□ -2.19
SKP1-203ENST00000517625 TNFRSF9Q07011 255 aa1.37□□□□□ -2.19
SKP1-203ENST00000517625 LGALSLQ3ZCW2 172 aaPredicted RBP1.37□□□□□ -2.19
SKP1-203ENST00000517625 PYDC2Q56P42 97 aa1.37□□□□□ -2.19
SKP1-203ENST00000517625 GLYATQ6IB77 296 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms