RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 NMNAT1Q9HAN9 279 aaPredicted RBP5.19□□□□□ -1.58
TRAPPC11-209ENST00000512476 TMEM100Q9NV29 134 aa5.19□□□□□ -1.58
TRAPPC11-209ENST00000512476 CARHSP1Q9Y2V2 147 aaKnown RBP5.19□□□□□ -1.58
TRAPPC11-209ENST00000512476 C5orf58C9J3I9 102 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 ICOSLGO75144 302 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 SULT1C4O75897 302 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 LGALS2P05162 132 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 OR9G9P0C7N8 305 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 PSG1P11464 419 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 HRH1P35367 487 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 CDC42P60953 191 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 CDKL1Q00532 357 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 OR2T5Q6IEZ7 315 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 PAMR1Q6UXH9 720 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 IFNEQ86WN2 208 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 CALHM3Q86XJ0 350 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 RDH10Q8IZV5 341 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 OR4M1Q8NGD0 313 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 OR9I1Q8NGQ6 314 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 OR2T29Q8NH02 315 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 FBXO25Q8TCJ0 367 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 SSC4DQ8WTU2 575 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 NODALQ96S42 347 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 PLEKHA3Q9HB20 300 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 SPANXB1Q9NS25 103 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 LRRC37A2A6NM11 1700 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 NFASCO94856 1347 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 TRPM7Q96QT4 1865 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 M0R1B8 84 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 OR2B3O76000 313 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 GM2AP17900 193 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 RND2P52198 227 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 RAB38P57729 211 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 ARL16Q0P5N6 197 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZNF266Q14584 549 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZNF626Q68DY1 528 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 C15orf54Q8N8G6 183 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZNF491Q8N8L2 437 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 DDIT4LQ96D03 193 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 RITA1Q96K30 269 aa5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 RTBDNQ9BSG5 229 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 SSBP3Q9BWW4 388 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC11-209ENST00000512476 SRCAPQ6ZRS2 3230 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 LOC101059948A0A1B0GTJ6 334 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 FAM236DA0A1B0GTK5 79 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 MYOCOSA0A1B0GUC4 107 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 MAP1LC3B2A6NCE7 125 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 TNFRSF11BO00300 401 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 ITM2AO43736 263 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 FAM20BO75063 409 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 FAM236CP0DP71 79 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 SLC2A5P22732 501 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 RBP2P50120 134 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 RHOBP62745 196 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 GNMTQ14749 295 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 OR8G1Q15617 311 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 MS4A13Q5J8X5 152 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 WDR82Q6UXN9 313 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZNF614Q8N883 585 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 OR51E1Q8TCB6 317 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 PTX4Q96A99 478 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 DIRAS2Q96HU8 199 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 MARVELD1Q9BSK0 173 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 FGFBP2Q9BYJ0 223 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 MAP1LC3BQ9GZQ8 125 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 RPF2Q9H7B2 306 aaKnown RBP5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZNF850A8MQ14 1090 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 K7EQS6 105 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 NR4A1P22736 598 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 PPP1CBP62140 327 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZNF154Q13106 437 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 KCNJ8Q15842 424 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 MSMPQ1L6U9 139 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 ODF3L2Q3SX64 289 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZNF57Q68EA5 555 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 DOLPP1Q86YN1 238 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZCCHC24Q8N2G6 241 aaKnown RBP5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 PYROXD1Q8WU10 500 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 TMEM255BQ8WV15 326 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 REEP6Q96HR9 211 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 Q9HAA7 133 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 ELF5Q9UKW6 265 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 SNX10Q9Y5X0 201 aa5.17□□□□□ -1.58
TRAPPC11-209ENST00000512476 LOXHD1Q8IVV2 1947 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 TP53BP1Q12888 1972 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 FABP7O15540 132 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZNF806P0C7X5 589 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 GGT1P19440 569 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 EIF2B2P49770 351 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 RARRES1P49788 294 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 TAS2R43P59537 309 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 DEFA3P59666 94 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 HPCAP84074 193 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 CYBRD1Q53TN4 286 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 PIK3CD-AS1Q5SR53 167 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 TMEM78Q5T7P6 136 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 UBE2UQ5VVX9 321 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 GPD1LQ8N335 351 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 GVQW1Q8N7I0 195 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 MZB1Q8WU39 189 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms