RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 TSSC4Q9Y5U2 329 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 TCRBV3S1A0A5B6 114 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 ZNF670-ZNF695F2Z2N8 137 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 H3BSH0 61 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 INMTO95050 263 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 RPP14O95059 124 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 PF4P02776 101 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 HTR1DP28221 377 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 PEX2P28328 305 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 EPHA2P29317 976 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 OR3A1P47881 315 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 IL18R1Q13478 541 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 ODF4Q2M2E3 257 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 SLX4IPQ5VYV7 408 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 C10orf99Q6UWK7 81 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 BAIAP2L2Q6UXY1 529 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 ZBTB49Q6ZSB9 765 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 CCDC121Q6ZUS5 278 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 EGFL6Q8IUX8 553 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 TMEM163Q8TC26 289 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 MYDGFQ969H8 173 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 NRBF2Q96F24 287 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 RCC1LQ96I51 464 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 PRRG3Q9BZD7 231 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 RBFOX1Q9NWB1 397 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 COL7A1Q02388 2944 aa11.28□□□□□ -0.6
POLR2J3-207ENST00000503564 TRBV2A0A0J9YWF9 115 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 WI2-2373I1.2A0A1W2PRP0 233 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 SYT7O43581 403 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 GATBO75879 557 aaKnown RBP11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 AMY1AP04745 511 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 AMY2AP04746 511 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 GABRR1P24046 479 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 CD24P25063 80 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 NPBWR2P48146 333 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 FUT6P51993 359 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 P2RX3P56373 397 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 BDH1Q02338 343 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 EGFEM1PQ0D2K5 195 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 ZNF146Q15072 292 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 C12orf73Q69YU5 71 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 TCEANCQ8N8B7 351 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 SLC25A33Q9BSK2 321 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 DPM3Q9P2X0 92 aa11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 UBE2J1Q9Y385 318 aaPredicted RBP11.27□□□□□ -0.61
POLR2J3-207ENST00000503564 ZAR1LA6NP61 321 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 MGST3O14880 152 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 MITFO75030 526 aaPredicted RBP11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 ENTPD6O75354 484 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 OR2F2O95006 317 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 DUS4LO95620 317 aaKnown RBP11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 IGLV1-47P01700 117 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 KRT8P05787 483 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 LPLP06858 475 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 BCL3P20749 454 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 DUSP1P28562 367 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 ERP29P30040 261 aaKnown RBP11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 GDNFP39905 211 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 FLOT2Q14254 428 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 ABCA11PQ4W5N1 156 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 PRAMEF5Q5TYX0 476 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 CENPVQ7Z7K6 275 aaPredicted RBP11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 SPATA24Q86W54 205 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 Q8IYB0 196 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 ENTHD1Q8IYW4 607 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 FAM58AQ8N1B3 248 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 PRSS35Q8N3Z0 413 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 YIPF7Q8N8F6 280 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 CCDC54Q8NEL0 328 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 OR4X2Q8NGF9 303 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 UTP4Q969X6 686 aaKnown RBP11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 BORCS8Q96FH0 119 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 AKR1E2Q96JD6 320 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 TBX5Q99593 518 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 HHLA2Q9UM44 414 aa11.26□□□□□ -0.61
POLR2J3-207ENST00000503564 DNAH9Q9NYC9 4486 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 IGKV1-9A0A0C4DH69 117 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 LOC107986453A0A1B0GWG9 222 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 A0A1W2PQL4 384 aaPredicted RBP11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 SH2D7A6NKC9 451 aaPredicted RBP11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 CD34P28906 385 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 SPIN3Q5JUX0 258 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 HEPN1Q6WQI6 88 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 ETV3LQ6ZN32 361 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 TRAPPC6BQ86SZ2 158 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 RTN4RL2Q86UN3 420 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 GID4Q8IVV7 300 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 ABHD12Q8N2K0 398 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 LINC00482Q8N8I6 264 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 DNAAF1Q8NEP3 725 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 ZNF596Q8TC21 504 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 RNF166Q96A37 237 aaPredicted RBP11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 C10orf35Q96D05 121 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 RBM14Q96PK6 669 aaKnown RBP11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 IL4I1Q96RQ9 567 aa11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.25□□□□□ -0.61
POLR2J3-207ENST00000503564 H2AFY2Q9P0M6 372 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms