RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CHRFAM7AQ494W8 412 aa18.77■□□□□ 0.6
PTPN13-205ENST00000502971 SPICQ8N5J4 248 aa18.77■□□□□ 0.6
PTPN13-205ENST00000502971 TMEM210A6NLX4 147 aa18.77■□□□□ 0.59
PTPN13-205ENST00000502971 OR4E1P0C645 316 aa18.77■□□□□ 0.59
PTPN13-205ENST00000502971 GCH1P30793 250 aa18.77■□□□□ 0.59
PTPN13-205ENST00000502971 ZNF83P51522 516 aa18.77■□□□□ 0.59
PTPN13-205ENST00000502971 DAZAP2Q15038 168 aaPredicted RBP18.77■□□□□ 0.59
PTPN13-205ENST00000502971 OR8G1Q15617 311 aa18.77■□□□□ 0.59
PTPN13-205ENST00000502971 C4orf46Q504U0 113 aa18.77■□□□□ 0.59
PTPN13-205ENST00000502971 TERB2Q8NHR7 220 aa18.77■□□□□ 0.59
PTPN13-205ENST00000502971 MRGPRFQ96AM1 343 aa18.77■□□□□ 0.59
PTPN13-205ENST00000502971 ZNF486Q96H40 463 aaPredicted RBP18.77■□□□□ 0.59
PTPN13-205ENST00000502971 VSIG4Q9Y279 399 aa18.77■□□□□ 0.59
PTPN13-205ENST00000502971 NPTNQ9Y639 398 aa18.77■□□□□ 0.59
PTPN13-205ENST00000502971 SPENQ96T58 3664 aaKnown RBP18.76■□□□□ 0.59
PTPN13-205ENST00000502971 F8VVB4 439 aa18.76■□□□□ 0.59
PTPN13-205ENST00000502971 F8VWA3 439 aa18.76■□□□□ 0.59
PTPN13-205ENST00000502971 ERP29P30040 261 aaKnown RBP18.76■□□□□ 0.59
PTPN13-205ENST00000502971 TSPAN5P62079 268 aa18.76■□□□□ 0.59
PTPN13-205ENST00000502971 TMED4Q7Z7H5 227 aa18.76■□□□□ 0.59
PTPN13-205ENST00000502971 BATF2Q8N1L9 274 aa18.76■□□□□ 0.59
PTPN13-205ENST00000502971 OR52B4Q8NGK2 314 aa18.76■□□□□ 0.59
PTPN13-205ENST00000502971 ZNF431Q8TF32 576 aaPredicted RBP18.76■□□□□ 0.59
PTPN13-205ENST00000502971 HDHD3Q9BSH5 251 aaPredicted RBP18.76■□□□□ 0.59
PTPN13-205ENST00000502971 POLDIP2Q9Y2S7 368 aa18.76■□□□□ 0.59
PTPN13-205ENST00000502971 SPEF1Q9Y4P9 236 aa18.76■□□□□ 0.59
PTPN13-205ENST00000502971 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.75■□□□□ 0.59
PTPN13-205ENST00000502971 OR2AT4A6NND4 320 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 M0R1B8 84 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 FCGR3AP08637 254 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 GZMKP49863 264 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 FAM27E3Q08E93 113 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 GRK1Q15835 563 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 TMEM211Q6ICI0 200 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 OVCH2Q7RTZ1 564 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 SLC25A42Q86VD7 318 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 ZBTB8BQ8NAP8 495 aaPredicted RBP18.75■□□□□ 0.59
PTPN13-205ENST00000502971 MAFIPQ8WZ33 124 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 ZNF436Q9C0F3 470 aaPredicted RBP18.75■□□□□ 0.59
PTPN13-205ENST00000502971 PPA2Q9H2U2 334 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 ZNF442Q9H7R0 627 aa18.75■□□□□ 0.59
PTPN13-205ENST00000502971 RCC2Q9P258 522 aaKnown RBP18.75■□□□□ 0.59
PTPN13-205ENST00000502971 CEACAM18A8MTB9 384 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 TIMM8AO60220 97 aaPredicted RBP18.74■□□□□ 0.59
PTPN13-205ENST00000502971 PRKACAP17612 351 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 IL13RA2Q14627 380 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 CDK10Q15131 360 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 FAHD2BQ6P2I3 314 aaPredicted RBP18.74■□□□□ 0.59
PTPN13-205ENST00000502971 WDR86Q86TI4 376 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 Q8IYB0 196 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 MUC20Q8N307 709 aaPredicted RBP18.74■□□□□ 0.59
PTPN13-205ENST00000502971 CAPSLQ8WWF8 208 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 FAHD2AQ96GK7 314 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 SCGB3A2Q96PL1 93 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 EHFQ9NZC4 300 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 JKAMPQ9P055 326 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 ANXA10Q9UJ72 324 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 ITPR1Q14643 2758 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 SPTA1P02549 2419 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 FABP7O15540 132 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 CRYAAP02489 173 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 ARPC4P59998 168 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 PDCD1Q15116 288 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 BRICD5Q6PL45 260 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 LHFPL1Q86WI0 220 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 FAM58AQ8N1B3 248 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 SPERTQ8NA61 448 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 SCCPDHQ8NBX0 429 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 HS3ST6Q96QI5 342 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 SPACA1Q9HBV2 294 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 C12orf4Q9NQ89 552 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 MGAT4CQ9UBM8 478 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 SH3BGRL2Q9UJC5 107 aa18.74■□□□□ 0.59
PTPN13-205ENST00000502971 FABP6P51161 128 aa18.73■□□□□ 0.59
PTPN13-205ENST00000502971 RGS7BPQ6MZT1 257 aaPredicted RBP18.73■□□□□ 0.59
PTPN13-205ENST00000502971 CXXC4Q9H2H0 198 aa18.73■□□□□ 0.59
PTPN13-205ENST00000502971 RANBP3Q9H6Z4 567 aaPredicted RBP18.73■□□□□ 0.59
PTPN13-205ENST00000502971 IGKV1D-8A0A087WSZ0 117 aa18.72■□□□□ 0.59
PTPN13-205ENST00000502971 RHBDL1O75783 438 aa18.72■□□□□ 0.59
PTPN13-205ENST00000502971 ACAA1P09110 424 aaPredicted RBP18.72■□□□□ 0.59
PTPN13-205ENST00000502971 ZNF154Q13106 437 aa18.72■□□□□ 0.59
PTPN13-205ENST00000502971 IKZF1Q13422 519 aa18.72■□□□□ 0.59
PTPN13-205ENST00000502971 LY6DQ14210 128 aa18.72■□□□□ 0.59
PTPN13-205ENST00000502971 PCSK4Q6UW60 755 aa18.72■□□□□ 0.59
PTPN13-205ENST00000502971 HYLS1Q96M11 299 aa18.72■□□□□ 0.59
PTPN13-205ENST00000502971 OSGIN2Q9Y236 505 aa18.72■□□□□ 0.59
PTPN13-205ENST00000502971 H0YL77 283 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 C16orf97H3BN30 126 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 MLNRO43193 412 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 GLAP06280 429 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 TAS2R31P59538 309 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 SSX8Q7RTT4 187 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 RELL2Q8NC24 303 aaPredicted RBP18.71■□□□□ 0.59
PTPN13-205ENST00000502971 OR13G1Q8NGZ3 307 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 MARCH1Q8TCQ1 289 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 DYRK2Q92630 601 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 ZNF488Q96MN9 340 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 VKORC1Q9BQB6 163 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 IFT22Q9H7X7 185 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 ZNF286AQ9HBT8 521 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms