RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 PRAF2O60831 178 aa15.13■□□□□ 0.01
CHRNA4-206ENST00000498043 HPXP02790 462 aa15.13■□□□□ 0.01
CHRNA4-206ENST00000498043 THBDP07204 575 aa15.13■□□□□ 0.01
CHRNA4-206ENST00000498043 FUT3P21217 361 aa15.13■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM58AQ8N1B3 248 aa15.13■□□□□ 0.01
CHRNA4-206ENST00000498043 KDF1Q8NAX2 398 aaPredicted RBP15.13■□□□□ 0.01
CHRNA4-206ENST00000498043 OR5H2Q8NGV7 314 aa15.13■□□□□ 0.01
CHRNA4-206ENST00000498043 GTF3AQ92664 365 aaKnown RBP15.13■□□□□ 0.01
CHRNA4-206ENST00000498043 SYT3Q9BQG1 590 aa15.13■□□□□ 0.01
CHRNA4-206ENST00000498043 SLC2A8Q9NY64 477 aa15.13■□□□□ 0.01
CHRNA4-206ENST00000498043 IGKV1D-8A0A087WSZ0 117 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A10PA6NDY2 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A18PA6NE21 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A16PA6NEW6 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A20PA6NIJ5 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A8PA6NJQ4 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A7PA6NKC0 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A22PA8MWA6 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A12PA8MX19 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A5PA8MXJ8 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A23PA8MXZ1 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A15PP0C7V4 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A13PP0C7W8 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A14PP0C7W9 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A24PP0C7X0 464 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 GLRXP35754 106 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 ACTBL2Q562R1 376 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 PCSK4Q6UW60 755 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 TMEM171Q8WVE6 324 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 DMRTB1Q96MA1 342 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FYTTD1Q96QD9 318 aaKnown RBP15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 USB1Q9BQ65 265 aaKnown RBP15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 PKD1L2Q7Z442 2459 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 CADP27708 2225 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FAM90A27PA6NNH2 459 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FCGR3AP08637 254 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 VSIG10L2P0DP72 767 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 ZNF250P15622 560 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 KLF3P57682 345 aaPredicted RBP15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 FCN2Q15485 313 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 MPV17LQ2QL34 196 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 C1QTNF12Q5T7M4 302 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 METTL11BQ5VVY1 283 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 PRAMEF6Q5VXH4 476 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 TMEM108Q6UXF1 575 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 GLDNQ6ZMI3 551 aaPredicted RBP15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 TMED4Q7Z7H5 227 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 MRGPRFQ96AM1 343 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 SLC25A21Q9BQT8 299 aaPredicted RBP15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 CXXC4Q9H2H0 198 aa15.12■□□□□ 0.01
CHRNA4-206ENST00000498043 TMEM82A0PJX8 343 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 SSNA1O43805 119 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 MECP2P51608 486 aaKnown RBP15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 TAS2R46P59540 309 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 MAB21L1Q13394 359 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 ZMYND11Q15326 602 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 CHRFAM7AQ494W8 412 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 VAX1Q5SQQ9 334 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 OR52B4Q8NGK2 314 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 OR13G1Q8NGZ3 307 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 PLK3Q9H4B4 646 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 C12orf4Q9NQ89 552 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 ZNF69Q9UC07 566 aa15.11■□□□□ 0.01
CHRNA4-206ENST00000498043 A6NLC8 198 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 OR2AT4A6NND4 320 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 ERVH48-1M5A8F1 160 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 SDCBPO00560 298 aaPredicted RBP15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 ABCD4O14678 606 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 OR3A3P47888 321 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 ASCL1P50553 236 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 RPS23P62266 143 aaKnown RBP15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 ZNF826PQ6ZT77 177 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 OR2Z1Q8NG97 314 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 OR11H7Q8NGC8 314 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 CAPSLQ8WWF8 208 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 POM121Q96HA1 1249 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 CHST6Q9GZX3 395 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 EHFQ9NZC4 300 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 RCC2Q9P258 522 aaKnown RBP15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 KALRNO60229 2985 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 IGHV3-13P01766 116 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 PGA5P0DJD9 388 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 DTYMKP23919 212 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 NKX2-5P52952 324 aaPredicted RBP15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 BSPH1Q075Z2 132 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 SNTB1Q13884 538 aaKnown RBP15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 MPPED2Q15777 294 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 ATPAF1Q5TC12 328 aaPredicted RBP15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 C17orf107Q6ZR85 190 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 OR5AP2Q8NGF4 316 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 NRIP2Q9BQI9 281 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 UFSP2Q9NUQ7 469 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 VSIG4Q9Y279 399 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 POLEQ07864 2286 aa15.1■□□□□ 0.01
CHRNA4-206ENST00000498043 ZSCAN5BA6NJL1 495 aa15.09■□□□□ 0.01
CHRNA4-206ENST00000498043 NXPH2O95156 264 aa15.09■□□□□ 0.01
CHRNA4-206ENST00000498043 PTAFRP25105 342 aa15.09■□□□□ 0.01
CHRNA4-206ENST00000498043 ARPC4P59998 168 aa15.09■□□□□ 0.01
CHRNA4-206ENST00000498043 ERVK11-1P61568 191 aa15.09■□□□□ 0.01
CHRNA4-206ENST00000498043 TSPAN5P62079 268 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms