RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PECRQ9BY49 303 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 MARF1Q9Y4F3 1742 aaKnown RBP16.95■□□□□ 0.3
COL27A1-207ENST00000494090 TUBGCP6Q96RT7 1819 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 ETFDHQ16134 617 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 HSD17B13Q7Z5P4 300 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-207ENST00000494090 ZNF426Q9BUY5 554 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 ZNF107Q9UII5 783 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-207ENST00000494090 LANCL1O43813 399 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 INHBBP09529 407 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 CALCRP30988 508 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 GNG10P50151 68 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 FAM3AP98173 230 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 OR8B12Q8NGG6 310 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 RPS4Y2Q8TD47 263 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 NTN1O95631 604 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 SLC38A11Q08AI6 406 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 ACSM6Q6P461 480 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 C16orf47Q6ZP98 133 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-207ENST00000494090 FAM103A1Q9BTL3 118 aaKnown RBP16.94■□□□□ 0.3
COL27A1-207ENST00000494090 WSB1Q9Y6I7 421 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 KLHDC1Q8N7A1 406 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 OR5C1Q8NGR4 320 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 TRIP11Q15643 1979 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 PLA2G10O15496 165 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 B3GALNT1O75752 331 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 LYZL6O75951 148 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 ERVFC1-1P60608 527 aa16.94■□□□□ 0.3
COL27A1-207ENST00000494090 RGS13O14921 159 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 CTSDP07339 412 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-207ENST00000494090 BHLHA15Q7RTS1 189 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-207ENST00000494090 OR1L4Q8NGR5 311 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 RASL10BQ96S79 203 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 SLC35B3Q9H1N7 401 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 PCOLCE2Q9UKZ9 415 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 MYO7AQ13402 2215 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 BRS3P32247 399 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 TMEM267Q0VDI3 215 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-207ENST00000494090 Q3ZCU0 254 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 GPR137Q96N19 417 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 RNF2Q99496 336 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 NQO2P16083 231 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 SRP14P37108 136 aaKnown RBP16.93■□□□□ 0.3
COL27A1-207ENST00000494090 ASCL1P50553 236 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 CLEC12BQ2HXU8 276 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 OR2C3Q8N628 320 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 LIPT2A6NK58 231 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 OR5AC1P0C628 307 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 MOGAT2Q3SYC2 334 aa16.93■□□□□ 0.3
COL27A1-207ENST00000494090 OR4C45A6NMZ5 311 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 MPGP29372 298 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 MISP3Q96FF7 219 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 NXF2Q9GZY0 626 aaKnown RBP16.92■□□□□ 0.3
COL27A1-207ENST00000494090 TOLLIPQ9H0E2 274 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 NARFLQ9H6Q4 476 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 CACNA1CQ13936 2221 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 CST2P09228 141 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 KCNK15Q9H427 330 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 LTBP4Q8N2S1 1624 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 COL4A1P02462 1669 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 OR2M5A3KFT3 312 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 SOX8P57073 446 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 MLF1P58340 268 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 FA2HQ7L5A8 372 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 TIPARPQ7Z3E1 657 aaKnown RBP16.92■□□□□ 0.3
COL27A1-207ENST00000494090 OR4S2Q8NH73 311 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 RND1Q92730 232 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 FBXL17Q9UF56 701 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 POMT1Q9Y6A1 747 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 KIAA1217Q5T5P2 1943 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 DNPH1O43598 174 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 ZNF79Q15937 498 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 FFAR4Q5NUL3 377 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 C1QL3Q5VWW1 255 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 TMEM91Q6ZNR0 172 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 C9orf62Q8N4C0 152 aa16.92■□□□□ 0.3
COL27A1-207ENST00000494090 J3QR89 54 aa16.91■□□□□ 0.3
COL27A1-207ENST00000494090 SFTPCP11686 197 aa16.91■□□□□ 0.3
COL27A1-207ENST00000494090 IL9P15248 144 aa16.91■□□□□ 0.3
COL27A1-207ENST00000494090 KLF9Q13886 244 aaPredicted RBP16.91■□□□□ 0.3
COL27A1-207ENST00000494090 INPP5JQ15735 1006 aaPredicted RBP16.91■□□□□ 0.3
COL27A1-207ENST00000494090 A0A1W2PR80 420 aa16.91■□□□□ 0.3
COL27A1-207ENST00000494090 FAM24AA6NFZ4 105 aa16.91■□□□□ 0.3
COL27A1-207ENST00000494090 RHOBP62745 196 aa16.91■□□□□ 0.3
COL27A1-207ENST00000494090 RANP62826 216 aaKnown RBP16.91■□□□□ 0.3
COL27A1-207ENST00000494090 B3GNTL1Q67FW5 361 aaPredicted RBP16.91■□□□□ 0.3
COL27A1-207ENST00000494090 DUSP15Q9H1R2 295 aaPredicted RBP16.91■□□□□ 0.3
COL27A1-207ENST00000494090 SUMO1P63165 101 aaKnown RBP16.91■□□□□ 0.3
COL27A1-207ENST00000494090 ARL2-SNX15V9GYD0 113 aa16.91■□□□□ 0.3
COL27A1-207ENST00000494090 CXCL3P19876 107 aa16.91■□□□□ 0.3
COL27A1-207ENST00000494090 COL19A1Q14993 1142 aa16.91■□□□□ 0.3
COL27A1-207ENST00000494090 FAM109BQ6ICB4 259 aaPredicted RBP16.91■□□□□ 0.3
COL27A1-207ENST00000494090 RFESDQ8TAC1 157 aa16.91■□□□□ 0.3
COL27A1-207ENST00000494090 NUDT16L1Q9BRJ7 211 aaKnown RBP16.91■□□□□ 0.3
COL27A1-207ENST00000494090 HSBP1O75506 76 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 OR4A8P0C604 315 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 ZAR1Q86SH2 424 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 OR6S1Q8NH40 331 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 CDX2Q99626 313 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-207ENST00000494090 OR2D2Q9H210 308 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 C1RLQ9NZP8 487 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms