RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SLC35A1P78382 337 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 CYCSP99999 105 aaKnown RBP2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 PRPSAP1Q14558 356 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 TRIP13Q15645 432 aaPredicted RBP2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 CEACAM16Q2WEN9 425 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 UBE2UQ5VVX9 321 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 NCCRP1Q6ZVX7 275 aaPredicted RBP2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 MRPL52Q86TS9 123 aaKnown RBP2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 SLC13A5Q86YT5 568 aaPredicted RBP2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF440Q8IYI8 595 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 TMEM61Q8N0U2 210 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 LYG1Q8N1E2 194 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 PNKDQ8N490 385 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 Q8NBF4 154 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF680Q8NEM1 530 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 OR10G3Q8NGC4 313 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 OR10J6PQ8NGY7 276 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 PPTC7Q8NI37 304 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 SYNPRQ8TBG9 265 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 HAVCR2Q8TDQ0 301 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 MRAP2Q96G30 205 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 KCTD7Q96MP8 289 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 SLIRPQ9GZT3 109 aaKnown RBP2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 ARL6Q9H0F7 186 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 DEFB127Q9H1M4 99 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF442Q9H7R0 627 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 MYOZ1Q9NP98 299 aaPredicted RBP2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 XPNPEP1Q9NQW7 623 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 KLHL21Q9UJP4 597 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 MMACHCQ9Y4U1 282 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 F11RQ9Y624 299 aaKnown RBP2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 SLC22A7Q9Y694 548 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 LRRK1Q38SD2 2015 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 LINC01619G3V211 115 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF593O00488 134 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 AGPAT2O15120 278 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 GATCO43716 136 aaKnown RBP2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 RDH16O75452 317 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 FOXH1O75593 365 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 C6orf47O95873 294 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 HLA-AP01891 365 aaKnown RBP2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 CDK1P06493 297 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 GNAO1P09471 354 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 OR5AL1P0C617 328 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 NQO1P15559 274 aaKnown RBP2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 PVALBP20472 110 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 RIDAP52758 137 aaKnown RBP2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 CEBPGP53567 150 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 DLX1P56177 255 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 AP1S2P56377 157 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 RAB8AP61006 207 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 RPL32P62910 135 aaKnown RBP2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 EGFEM1PQ0D2K5 195 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 AQP6Q13520 282 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 OR1Q1Q15612 314 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 ATP6AP1Q15904 470 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 CEACAM21Q3KPI0 293 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF658BQ4V348 819 aaPredicted RBP2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 C2CD6Q53TS8 623 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 PDZD11Q5EBL8 140 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 SLC30A8Q8IWU4 369 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 C10orf67Q8IYJ2 551 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 CCNYL1Q8N7R7 359 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 OR1M1Q8NGA1 313 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 ITLN1Q8WWA0 313 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 RIOK2Q9BVS4 552 aaKnown RBP2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 YTHDF1Q9BYJ9 559 aaKnown RBP2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 ZBP1Q9H171 429 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 MFSD1Q9H3U5 465 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 DSN1Q9H410 356 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 FBXL15Q9H469 300 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 PRORYQ9H606 182 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 RPS10P5Q9NQ39 176 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 INIPQ9NRY2 104 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 NDE1Q9NXR1 346 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 OPN4Q9UHM6 478 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 CD84Q9UIB8 345 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 SLC22A13Q9Y226 551 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 USH1CQ9Y6N9 552 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 WDR87Q6ZQQ6 2873 aa2.37□□□□□ -2.03
DEPDC1-204ENST00000489862 MYO7AQ13402 2215 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 NFASCO94856 1347 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 LTBP2Q14767 1821 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 DHRS7CA6NNS2 312 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 TNFRSF11BO00300 401 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 SLC16A4O15374 487 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 RAD1O60671 282 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 CNIH1O95406 144 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 SMIM10L2AP0DMW4 78 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 SMIM10L2BP0DMW5 78 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 SLC2A1P11166 492 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 GFAPP14136 432 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 HIST1H1CP16403 213 aaKnown RBP2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 TSPOP30536 169 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF138P52744 262 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 CCL23P55773 120 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 DLX6P56179 175 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 RAB38P57729 211 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 PRR3P79522 188 aaKnown RBP2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 CCL7P80098 99 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms