RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	XAF1	Q6GPH4	301 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	METAP1D	Q6UB28	335 aa	Predicted RBP	9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	SAXO1	Q8IYX7	474 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772		Q8N7P7	452 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	OR4M1	Q8NGD0	313 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	OR5D18	Q8NGL1	313 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	OR5D13	Q8NGL4	314 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	RPS4Y2	Q8TD47	263 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	NRG4	Q8WWG1	115 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	RGP1	Q92546	391 aa	Predicted RBP	9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	GHSR	Q92847	366 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	RFT1	Q96AA3	541 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	DUX5	Q96PT3	197 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	SPACA5	Q96QH8	159 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	PRDM13	Q9H4Q3	707 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	SEBOX	Q9HB31	216 aa	Predicted RBP	9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	RHOF	Q9HBH0	211 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	ERGIC3	Q9Y282	383 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	FAM96B	Q9Y3D0	163 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	PCDHGB5	Q9Y5G0	923 aa		9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	SIRT4	Q9Y6E7	314 aa	Predicted RBP	9.11	□□□□□ -0.95
GGA1-222	ENST00000489772	HOXA3	O43365	443 aa	Predicted RBP	9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	ANGPTL7	O43827	346 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	ZNF737	O75373	536 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	KDM4B	O94953	1096 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	RNASE1	P07998	156 aa	Known RBP	9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	TMEM225B	P0DP42	221 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	PRKACA	P17612	351 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	C21orf33	P30042	268 aa	Predicted RBP	9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	TAS2R43	P59537	309 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	PPP3R1	P63098	170 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	ZNF146	Q15072	292 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	YIF1B	Q5BJH7	314 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	TMEM200B	Q69YZ2	307 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	C12orf54	Q6X4T0	127 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772		Q6YL49	198 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	GDPD3	Q7L5L3	318 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	OR8H2	Q8N162	312 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	TMEM106A	Q96A25	262 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	SNX22	Q96L94	193 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	C1orf147	Q96MC9	270 aa	Predicted RBP	9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	UNKL	Q9H9P5	680 aa	Known RBP	9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	HMG20A	Q9NP66	347 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	TAS2R4	Q9NYW5	299 aa		9.1	□□□□□ -0.95
GGA1-222	ENST00000489772	IGKV1-12	A0A0C4DH73	117 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772		A0A0U1RQK1	487 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	TMEM89	A2RUT3	159 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	PTGES3L	E9PB15	166 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	RNASEK-C17orf49	H0YIS7	233 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	SH2D1B	O14796	132 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	LALBA	P00709	142 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	IGKV1D-12	P01611	117 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	CALCB	P10092	127 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	GABRR1	P24046	479 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	DUSP1	P28562	367 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	UBE2E1	P51965	193 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	SNU13	P55769	128 aa	Known RBP	9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	WNT4	P56705	351 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	EDDM3B	P56851	147 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	PRB3	Q04118	309 aa	Predicted RBP	9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	C6orf141	Q5SZD1	244 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	DMKN	Q6E0U4	476 aa	Predicted RBP	9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	ZNF529	Q6P280	563 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	SATL1	Q86VE3	508 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	ZFP41	Q8N8Y5	198 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	ZNF485	Q8NCK3	441 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	PPP1R35	Q8TAP8	253 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	TNFRSF14	Q92956	283 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	MYDGF	Q969H8	173 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	GPER1	Q99527	375 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	EXOSC4	Q9NPD3	245 aa	Known RBP	9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	FKBP14	Q9NWM8	211 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	SCN3B	Q9NY72	215 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	IL36RN	Q9UBH0	155 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	CKLF	Q9UBR5	152 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	GSTK1	Q9Y2Q3	226 aa		9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	SF3B6	Q9Y3B4	125 aa	Known RBP	9.09	□□□□□ -0.95
GGA1-222	ENST00000489772	TMEM82	A0PJX8	343 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	NPFF	O15130	113 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	ALDOB	P05062	364 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	CDK1	P06493	297 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	MELTF	P08582	738 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	COMP	P49747	757 aa	Predicted RBP	9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	BMX	P51813	675 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	DLX1	P56177	255 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	ZP1	P60852	638 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	ACSM1	Q08AH1	577 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	EDDM3A	Q14507	147 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	GRK1	Q15835	563 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772		Q499Y3	187 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	RNLS	Q5VYX0	342 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	C16orf87	Q6PH81	154 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	C17orf107	Q6ZR85	190 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	RNF144B	Q7Z419	303 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	TMEM86B	Q8N661	226 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	NANOGP1	Q8N7R0	232 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	OR52N4	Q8NGI2	321 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	OR51A2	Q8NGJ7	313 aa		9.08	□□□□□ -0.96
GGA1-222	ENST00000489772	TNFAIP8L1	Q8WVP5	186 aa		9.08	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms