RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 STAG3L2P0CL84 134 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 RPS4Y1P22090 263 aaKnown RBP7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 PPOXP50336 477 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 PRDX4Q13162 271 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 ACSM6Q6P461 480 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 ETV3LQ6ZN32 361 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 NPEPL1Q8NDH3 523 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 TOGARAM1Q9Y4F4 1720 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 IGHV3-15A0A0B4J1V0 119 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 TNFSF11O14788 317 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 CTLA4P16410 223 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 ZNF117Q03924 483 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 HIST3H3Q16695 136 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 ZNF718Q3SXZ3 478 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 AMER3Q8N944 861 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 OR4D11Q8NGI4 311 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 KCNK15Q9H427 330 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 GNB4Q9HAV0 340 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 SH2D2AQ9NP31 389 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 SYNGR2O43760 224 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 PDE6DO43924 150 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 SEMA7AO75326 666 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 DEDDO75618 318 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 CEACAM6P40199 344 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 RPL11P62913 178 aaKnown RBP7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 BHLHA9Q7RTU4 235 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 CPEB3Q8NE35 698 aaKnown RBP7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 OR2M7Q8NG81 312 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 OR1N1Q8NGS0 311 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 OR1A1Q9P1Q5 309 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 ZMIZ1Q9ULJ6 1067 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 PLRG1O43660 514 aaKnown RBP7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 GAPDHP04406 335 aaKnown RBP7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 DDTP30046 118 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 RBPJQ06330 500 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 CEACAM16Q2WEN9 425 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 ZNF880Q6PDB4 577 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 C10orf111Q8N326 155 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 FBXO17Q96EF6 278 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 TMEM167BQ9NRX6 74 aa7.34□□□□□ -1.23
MCF2L2-212ENST00000488149 CBR3O75828 277 aa7.34□□□□□ -1.24
MCF2L2-212ENST00000488149 ZNF683Q8IZ20 524 aa7.34□□□□□ -1.24
MCF2L2-212ENST00000488149 ZNF738Q8NE65 137 aa7.34□□□□□ -1.24
MCF2L2-212ENST00000488149 TBX15Q96SF7 602 aa7.34□□□□□ -1.24
MCF2L2-212ENST00000488149 FOXB1Q99853 325 aa7.34□□□□□ -1.24
MCF2L2-212ENST00000488149 MAP1LC3CQ9BXW4 147 aa7.34□□□□□ -1.24
MCF2L2-212ENST00000488149 DMRT1Q9Y5R6 373 aa7.34□□□□□ -1.24
MCF2L2-212ENST00000488149 IGHV3-64DA0A0J9YX35 117 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 FAM87AP0C7U9 286 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 EWSR1Q01844 656 aaKnown RBP eCLIP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 HLA-BQ31612 363 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 LIMS2Q7Z4I7 341 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 SLC35E3Q7Z769 313 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 WDR13Q9H1Z4 485 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 CHST1O43916 411 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 ZNF362Q5T0B9 420 aaPredicted RBP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 VN1R17PQ8TDU5 208 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 MCHR2Q969V1 340 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 AAMDCQ9H7C9 122 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 MRPS2Q9Y399 296 aaKnown RBP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 LRRC3CA6NJW4 275 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 OR2J3O76001 311 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 SLC25A5P05141 298 aaKnown RBP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 FGF2P09038 288 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 CAMPP49913 170 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 PAFAH1B2P68402 229 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 TBC1D26Q86UD7 250 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 KMT5CQ86Y97 462 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 SPPL3Q8TCT6 385 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 MS4A3Q96HJ5 214 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 TMEM56Q96MV1 263 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 MPTX1A8MV57 137 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 CD1AP06126 327 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 ADAD2Q8NCV1 583 aaKnown RBP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 OR2T6Q8NHC8 308 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 PTX4Q96A99 478 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 TRMT61AQ96FX7 289 aaKnown RBP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 ALKBH3Q96Q83 286 aaPredicted RBP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 STARD10Q9Y365 291 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 TRPM6Q9BX84 2022 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 KNTC1P50748 2209 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 ALS2Q96Q42 1657 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 PMS2P1A4D2B8 440 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 PLPP3O14495 311 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 CFDP00746 253 aaPredicted RBP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 ZGLP1P0C6A0 271 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 MICBQ29980 383 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 RGP1Q92546 391 aaPredicted RBP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 SPACA9Q96E40 222 aaPredicted RBP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 MOGAT1Q96PD6 335 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 PRR13Q9NZ81 148 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 PQLC2LA1A4F0 135 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 ALG1L2C9J202 215 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 HYAL3O43820 417 aaPredicted RBP7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 FAM157BP0CG42 384 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 HOXA6P31267 233 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 TM4SF4P48230 202 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 CCR5P51681 352 aa7.33□□□□□ -1.24
MCF2L2-212ENST00000488149 DSCR4P56555 118 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms