RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 VAMP8Q9BV40 100 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 ZFP64Q9NPA5 681 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 RBFOX3A6NFN3 312 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 FCGR3BO75015 233 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 IGF2P01344 180 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 SMIM17P0DL12 118 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 HSBP1O75506 76 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 C1QCP02747 245 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 LSM6P62312 80 aaKnown RBP14.54□□□□□ -0.08
COL7A1-210ENST00000487017 STUMQ69YW2 141 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 ETFRF1Q6IPR1 90 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 RHBDD2Q6NTF9 364 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 ASB5Q8WWX0 329 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 FBXO17Q96EF6 278 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 PARD6AQ9NPB6 346 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 STARD10Q9Y365 291 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 ZNF785A8K8V0 405 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 M0QZ24 198 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 HLA-DRB3P79483 266 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 FAM3AP98173 230 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 SLC52A3Q9NQ40 469 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 MARF1Q9Y4F3 1742 aaKnown RBP14.54□□□□□ -0.08
COL7A1-210ENST00000487017 HRKO00198 91 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 HRASP01112 189 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 OR2M7Q8NG81 312 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 C10orf35Q96D05 121 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 PSG11Q9UQ72 335 aa14.54□□□□□ -0.08
COL7A1-210ENST00000487017 POLR2GP62487 172 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL7A1-210ENST00000487017 SRSF5Q13243 272 aaKnown RBP14.53□□□□□ -0.08
COL7A1-210ENST00000487017 SEC11CQ9BY50 192 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 WDR13Q9H1Z4 485 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 HES4Q9HCC6 221 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 BGLAPP02818 100 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 MEOX2P50222 304 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 VMA21Q3ZAQ7 101 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 MYPOPQ86VE0 399 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-210ENST00000487017 OR2D2Q9H210 308 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 DEFB108AA8MXU0 73 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 PATE4P0C8F1 98 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 S100A4P26447 101 aaKnown RBP14.53□□□□□ -0.08
COL7A1-210ENST00000487017 ZXDAP98168 799 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 TOMM20LQ6UXN7 152 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 PPP1R3EQ9H7J1 279 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 CES1P1Q9UKY3 287 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 OR5B21A6NL26 309 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 MBPP02686 304 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-210ENST00000487017 RBP4P02753 201 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 MEOX1P50221 254 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 DYNLT3P51808 116 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 ATP6V1FQ16864 119 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 Q3ZCU0 254 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 AWAT1Q58HT5 328 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 ZNF766Q5HY98 468 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 TBC1D26Q86UD7 250 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 TMEM9BQ9NQ34 198 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 NUP214P35658 2090 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-210ENST00000487017 C7orf66A4D0T2 115 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 PMCHP20382 165 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 CDC34P49427 236 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-210ENST00000487017 LIAT1Q6ZQX7 453 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 ONECUT1Q9UBC0 465 aa14.53□□□□□ -0.08
COL7A1-210ENST00000487017 DHRS7BQ6IAN0 325 aaPredicted RBP14.52□□□□□ -0.08
COL7A1-210ENST00000487017 OR10G4Q8NGN3 311 aa14.52□□□□□ -0.08
COL7A1-210ENST00000487017 OR10G9Q8NGN4 311 aa14.52□□□□□ -0.08
COL7A1-210ENST00000487017 OR10G7Q8NGN6 311 aa14.52□□□□□ -0.08
COL7A1-210ENST00000487017 TMEM56Q96MV1 263 aa14.52□□□□□ -0.08
COL7A1-210ENST00000487017 A0A1W2PR80 420 aa14.52□□□□□ -0.08
COL7A1-210ENST00000487017 PTP4A3O75365 173 aa14.52□□□□□ -0.08
COL7A1-210ENST00000487017 GGTLC2Q14390 218 aa14.52□□□□□ -0.08
COL7A1-210ENST00000487017 FZR1Q9UM11 496 aa14.52□□□□□ -0.08
COL7A1-210ENST00000487017 YTHDF2Q9Y5A9 579 aaKnown RBP14.52□□□□□ -0.08
COL7A1-210ENST00000487017 TOX3O15405 576 aaPredicted RBP14.52□□□□□ -0.09
COL7A1-210ENST00000487017 TNFRSF1AP19438 455 aa14.52□□□□□ -0.09
COL7A1-210ENST00000487017 GNG10P50151 68 aa14.52□□□□□ -0.09
COL7A1-210ENST00000487017 TMEM147Q9BVK8 224 aa14.52□□□□□ -0.09
COL7A1-210ENST00000487017 SLC25A22Q9H936 323 aa14.52□□□□□ -0.09
COL7A1-210ENST00000487017 CCL2P13500 99 aa14.52□□□□□ -0.09
COL7A1-210ENST00000487017 ACSM6Q6P461 480 aa14.52□□□□□ -0.09
COL7A1-210ENST00000487017 DPF1Q92782 380 aa14.52□□□□□ -0.09
COL7A1-210ENST00000487017 SLC45A2Q9UMX9 530 aa14.52□□□□□ -0.09
COL7A1-210ENST00000487017 FGF2P09038 288 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 FGF8P55075 233 aaPredicted RBP14.51□□□□□ -0.09
COL7A1-210ENST00000487017 RAC3P60763 192 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 C19orf57Q0VDD7 668 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 SSPNQ14714 243 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 LRRC10Q5BKY1 277 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 C1orf53Q5VUE5 145 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 GTF2H5Q6ZYL4 71 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 RFESDQ8TAC1 157 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 FBLIM1Q8WUP2 373 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 ATP5SQ99766 215 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 IER2Q9BTL4 223 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 CLEC5AQ9NY25 188 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 NDUFB3O43676 98 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 EML2O95834 649 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 KIR2DS2P43631 304 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 MICBQ29980 383 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 TSPO2Q5TGU0 170 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 DEFB123Q8N688 67 aa14.51□□□□□ -0.09
COL7A1-210ENST00000487017 OR13G1Q8NGZ3 307 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms