RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 LUMP51884 338 aaPredicted RBP10.16□□□□□ -0.78
UBR4-213ENST00000483922 APOFQ13790 326 aa10.16□□□□□ -0.78
UBR4-213ENST00000483922 GRK1Q15835 563 aa10.16□□□□□ -0.78
UBR4-213ENST00000483922 SLC35D3Q5M8T2 416 aa10.16□□□□□ -0.78
UBR4-213ENST00000483922 ELMOD2Q8IZ81 293 aa10.16□□□□□ -0.78
UBR4-213ENST00000483922 HS3ST5Q8IZT8 346 aa10.16□□□□□ -0.78
UBR4-213ENST00000483922 DPF1Q92782 380 aa10.16□□□□□ -0.78
UBR4-213ENST00000483922 MROQ9BYG7 248 aa10.16□□□□□ -0.78
UBR4-213ENST00000483922 YIPF3Q9GZM5 350 aa10.16□□□□□ -0.78
UBR4-213ENST00000483922 SEBOXQ9HB31 216 aaPredicted RBP10.16□□□□□ -0.78
UBR4-213ENST00000483922 ZNF446Q9NWS9 450 aa10.16□□□□□ -0.78
UBR4-213ENST00000483922 ACTR3BQ9P1U1 418 aa10.16□□□□□ -0.78
UBR4-213ENST00000483922 SCOCQ9UIL1 159 aa10.16□□□□□ -0.78
UBR4-213ENST00000483922 FAM230AA0A1W2PPH8 454 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 ARRDC5A6NEK1 342 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 H3BSH0 61 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 BUB1B-PAK6H3BSN5 160 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 ZNF254O75437 659 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 HAND1O96004 215 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 OR3A4PP47883 348 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 ZNF91Q05481 1191 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 IL18R1Q13478 541 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 DIAPH2-AS1Q14236 149 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 TPTE2P1Q5T6R2 138 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 LCN1P1Q5VSP4 162 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 BCDIN3DQ7Z5W3 292 aaKnown RBP10.15□□□□□ -0.78
UBR4-213ENST00000483922 DEFB107AQ8IZN7 70 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 AKR1E2Q96JD6 320 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 CEP19Q96LK0 163 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 MCRIP2Q9BUT9 160 aaKnown RBP10.15□□□□□ -0.78
UBR4-213ENST00000483922 GPR61Q9BZJ8 451 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 REEP1Q9H902 201 aa10.15□□□□□ -0.78
UBR4-213ENST00000483922 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.15□□□□□ -0.78
UBR4-213ENST00000483922 LEUTXA8MZ59 168 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 DNAJC8O75937 253 aaPredicted RBP10.14□□□□□ -0.79
UBR4-213ENST00000483922 ZFPL1O95159 310 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 CCL1P22362 96 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 PRKACGP22612 351 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 GABRR1P24046 479 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 CDK2P24941 298 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 BRS3P32247 399 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 GLIPR1P48060 266 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 ESRRGP62508 458 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 KCTD18Q6PI47 426 aaPredicted RBP10.14□□□□□ -0.79
UBR4-213ENST00000483922 UNQ9370/PRO34162Q6UXP9 181 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 ZBTB49Q6ZSB9 765 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 LCNL1Q6ZST4 164 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 MUC7Q8TAX7 377 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 GIPC3Q8TF64 312 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 CORO2AQ92828 525 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 MAGIXQ9H6Y5 334 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 RBFOX1Q9NWB1 397 aaKnown RBP10.14□□□□□ -0.79
UBR4-213ENST00000483922 MRM2Q9UI43 246 aaKnown RBP10.14□□□□□ -0.79
UBR4-213ENST00000483922 OR52A1Q9UKL2 312 aa10.14□□□□□ -0.79
UBR4-213ENST00000483922 UBE2J1Q9Y385 318 aaPredicted RBP10.14□□□□□ -0.79
UBR4-213ENST00000483922 LOC110117498-PIK3R3F6TDL0 507 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 RAMP3O60896 148 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 BCL3P20749 454 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 PEX2P28328 305 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 CD34P28906 385 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 ERP29P30040 261 aaKnown RBP10.13□□□□□ -0.79
UBR4-213ENST00000483922 RIDAP52758 137 aaKnown RBP10.13□□□□□ -0.79
UBR4-213ENST00000483922 P2RX3P56373 397 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 RPS7P62081 194 aaKnown RBP10.13□□□□□ -0.79
UBR4-213ENST00000483922 C17orf58Q2M2W7 97 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 HLA-DRB5Q30154 266 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 DEFB136Q30KP8 78 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 HEPN1Q6WQI6 88 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 SLC25A26Q70HW3 274 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 PIGWQ7Z7B1 504 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 RTN4RL2Q86UN3 420 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 C5orf56Q8N8D9 126 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 KLHL30-AS1Q8NEE0 82 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 OR51D1Q8NGF3 324 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 CAPSLQ8WWF8 208 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 KRTAP17-1Q9BYP8 105 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 PAPOLBQ9NRJ5 636 aaKnown RBP10.13□□□□□ -0.79
UBR4-213ENST00000483922 ZFP57Q9NU63 452 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 R4GMQ9 66 aa10.13□□□□□ -0.79
UBR4-213ENST00000483922 A0A087X0M5 115 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 A0A1B0GX30 115 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 H3BUI4 141 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 CCL24O00175 119 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 MGST3O14880 152 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 ENTPD6O75354 484 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 E2F6O75461 281 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 HMGN1P05114 100 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 OSMP13725 252 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 SNU13P55769 128 aaKnown RBP10.12□□□□□ -0.79
UBR4-213ENST00000483922 AESQ08117 197 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 DCTN2Q13561 401 aaKnown RBP10.12□□□□□ -0.79
UBR4-213ENST00000483922 ZNF146Q15072 292 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 SNAPC1Q16533 368 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 ODF4Q2M2E3 257 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 ZNF829Q3KNS6 432 aaPredicted RBP10.12□□□□□ -0.79
UBR4-213ENST00000483922 SSX6Q7RTT6 188 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 THNSL2Q86YJ6 484 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 SBSPONQ8IVN8 264 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 ZNF695Q8IW36 515 aa10.12□□□□□ -0.79
UBR4-213ENST00000483922 ASB17Q8WXJ9 295 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms