RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 RBMXP38159 391 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 SNU13P55769 128 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 SNRPD2P62316 118 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 MEF2DQ14814 521 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 FAM189A2Q15884 450 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 NLRC3Q7RTR2 1065 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 HOGA1Q86XE5 327 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 CISD2Q8N5K1 135 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 ZNF565Q8N9K5 539 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 OR5P3Q8WZ94 311 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 EMG1Q92979 244 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 TECTBQ96PL2 329 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 TMEM246Q9BRR3 403 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 CHIAQ9BZP6 476 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 ZNF436Q9C0F3 470 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 PPP1R14DQ9NXH3 145 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 IL36GQ9NZH8 169 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 AK3Q9UIJ7 227 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 NPTNQ9Y639 398 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 ESPL1Q14674 2120 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 IGHV3-64DA0A0J9YX35 117 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 B8ZZF3 427 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 ZNF780AO75290 641 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 ZNF205O95201 554 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 SELEP16581 610 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 MPZP25189 248 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 CHATP28329 748 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 ERP29P30040 261 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 UCP2P55851 309 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 PRR30Q53SZ7 412 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 DCAF12L2Q5VW00 463 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 C22orf34Q6ZV56 151 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 UXS1Q8NBZ7 420 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 ADAD2Q8NCV1 583 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 CSNK2A3Q8NEV1 391 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 CPNE2Q96FN4 548 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 BOD1Q96IK1 185 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 ZNF488Q96MN9 340 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 PRRT1Q99946 306 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 ALX4Q9H161 411 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 MGAT4CQ9UBM8 478 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 PROCRQ9UNN8 238 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 SHANK1Q9Y566 2161 aa7.56□□□□□ -1.2
CDC42SE1-204ENST00000483763 DISC1C4P0D8 188 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 ST8SIA5O15466 376 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 RHBDL1O75783 438 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 CECR9P0C854 216 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 ZNF35P13682 527 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 CBR1P16152 277 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 DUSP1P28562 367 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 OPRM1P35372 400 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 MPV17P39210 176 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 TDGF1P3P51864 188 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 RBM11P57052 281 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 PPP1CBP62140 327 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 PSG7Q13046 419 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 DHRS2Q13268 280 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 AADACL3Q5VUY0 350 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 HAGHLQ6PII5 290 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 FBXW12Q6X9E4 464 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 WDR86Q86TI4 376 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 ZSCAN4Q8NAM6 433 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 Q8NFD4 153 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 OR2T35Q8NGX2 323 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 SLC25A40Q8TBP6 338 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 MARCH1Q8TCQ1 289 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 LIME1Q9H400 295 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 ZNF701Q9NV72 531 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 PLEKHA6Q9Y2H5 1048 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 UBE2QL1A1L167 161 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 ANKRD30BLA7E2S9 258 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 OR7C1O76099 320 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 IFNA6P05013 189 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 PI3P19957 117 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 AMY2BP19961 511 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 PTGER4P35408 488 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 NPY4RP50391 375 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 HOXA4Q00056 320 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 BAMBIQ13145 260 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 ZNF124Q15973 351 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 VAX1Q5SQQ9 334 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 OVCH2Q7RTZ1 564 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 C5orf24Q7Z6I8 188 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 CCDC36Q8IYA8 594 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 FTMTQ8N4E7 242 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 OR5A2Q8NGI9 324 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 OR5L1Q8NGL2 311 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 OR1J1Q8NGS3 322 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 TERB2Q8NHR7 220 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 ZFAND1Q8TCF1 268 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 MRPS24Q96EL2 167 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 HSF4Q9ULV5 492 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 FZR1Q9UM11 496 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 MGAT4AQ9UM21 535 aa7.55□□□□□ -1.2
CDC42SE1-204ENST00000483763 MYO18BQ8IUG5 2567 aa7.54□□□□□ -1.2
CDC42SE1-204ENST00000483763 SHOXO15266 292 aa7.54□□□□□ -1.2
CDC42SE1-204ENST00000483763 C1QL1O75973 258 aa7.54□□□□□ -1.2
CDC42SE1-204ENST00000483763 TBPP20226 339 aa7.54□□□□□ -1.2
CDC42SE1-204ENST00000483763 PPP1R1AQ13522 171 aa7.54□□□□□ -1.2
CDC42SE1-204ENST00000483763 P2RY6Q15077 328 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms