RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 ZNF620Q6ZNG0 422 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 MRGPRGQ86SM5 289 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 OAFQ86UD1 273 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 COX18Q8N8Q8 333 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 CYGBQ8WWM9 190 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 UCN3Q969E3 161 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 CLDN23Q96B33 292 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 BIRC8Q96P09 236 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 MED18Q9BUE0 208 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 TMED9Q9BVK6 235 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 C11orf49Q9H6J7 331 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 TMEM100Q9NV29 134 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 MON2Q7Z3U7 1717 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 CD163L1Q9NR16 1453 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 A0A087WUJ7 227 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 PRAC2D3DTV9 90 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 C6orf47O95873 294 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 MOSP00540 346 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 IFNA1P01562 189 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 CLEC12AQ5QGZ9 265 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 UGT2A3Q6UWM9 527 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 Q6ZPA2 131 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 Q6ZRP5 223 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 ZNF627Q7L945 461 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 GLT6D1Q7Z4J2 308 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 C17orf82Q86X59 251 aaPredicted RBP6.36□□□□□ -1.39
LSM5-210ENST00000480956 ZNF676Q8N7Q3 588 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 OR10K1Q8NGX5 313 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 OR9G1Q8NH87 305 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 YIPF5Q969M3 257 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 TCEAL4Q96EI5 215 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 CMSS1Q9BQ75 279 aaKnown RBP6.36□□□□□ -1.39
LSM5-210ENST00000480956 CLEC7AQ9BXN2 247 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 SLIRPQ9GZT3 109 aaKnown RBP6.36□□□□□ -1.39
LSM5-210ENST00000480956 TXNIPQ9H3M7 391 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 TPK1Q9H3S4 243 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 SLC7A10Q9NS82 523 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 POLR1DQ9Y2S0 133 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 LRRC7Q96NW7 1537 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 DNAJC9-AS1A6NH13 148 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 H7C417 338 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 M0QZK8 103 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 PAX6P26367 422 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 RCVRNP35243 200 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 CACNG7P62955 275 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 TTC32Q5I0X7 151 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 AVPI1Q5T686 147 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 NUP37Q8NFH4 326 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 OR4P4Q8NGL7 312 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 OR1P1Q8NH06 330 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 DDB2Q92466 427 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 MARC2Q969Z3 335 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 FAM3DQ96BQ1 224 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 ZNF747Q9BV97 191 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 ARMCX1Q9P291 453 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 MTFP1Q9UDX5 166 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 UFC1Q9Y3C8 167 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 FAM32AQ9Y421 112 aaKnown RBP6.36□□□□□ -1.39
LSM5-210ENST00000480956 SLC22A7Q9Y694 548 aa6.36□□□□□ -1.39
LSM5-210ENST00000480956 GREB1LQ9C091 1923 aaPredicted RBP6.35□□□□□ -1.39
LSM5-210ENST00000480956 ARHGEF17Q96PE2 2063 aaPredicted RBP6.35□□□□□ -1.39
LSM5-210ENST00000480956 A0A0G2JMP0 313 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 TRIM49D1C9J1S8 452 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 MED6O75586 246 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 REM1O75628 298 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 CRHP06850 196 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 GIPP09681 153 aaPredicted RBP6.35□□□□□ -1.39
LSM5-210ENST00000480956 OR8U8P0C7N1 319 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 SCGB1A1P11684 91 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 NAA20P61599 178 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 MS4A2Q01362 244 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 OR10K2Q6IF99 312 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 SPNS3Q6ZMD2 512 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 SLC26A10Q8NG04 563 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 OR4M2Q8NGB6 313 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 FAM210BQ96KR6 192 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 OR2M4Q96R27 311 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 KIFC1Q9BW19 673 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 BIN3Q9NQY0 253 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 ZNF225Q9UK10 706 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 DKKL1Q9UK85 242 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 OR51B4Q9Y5P0 310 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 NRKQ7Z2Y5 1582 aa6.35□□□□□ -1.39
LSM5-210ENST00000480956 KTN1Q86UP2 1357 aaKnown RBP6.35□□□□□ -1.39
LSM5-210ENST00000480956 ANKRD26Q9UPS8 1709 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 RBFOX3A6NFN3 312 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 ARPC5O15511 151 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 LINC00614P0C842 121 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 MARK3P27448 753 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 BTCP35070 178 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 VSX2P58304 361 aaPredicted RBP6.34□□□□□ -1.39
LSM5-210ENST00000480956 RBX1P62877 108 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 HBG1P69891 147 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 HBG2P69892 147 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 ZNF763Q0D2J5 394 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 RSU1Q15404 277 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 SIX1Q15475 284 aaPredicted RBP6.34□□□□□ -1.39
LSM5-210ENST00000480956 TRMT12Q53H54 448 aaKnown RBP6.34□□□□□ -1.39
LSM5-210ENST00000480956 C1orf146Q5VVC0 180 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 STEAP4Q687X5 459 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms