RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 MAP2K4P45985 399 aa16.94■□□□□ 0.3
VARS-224ENST00000479051 TRAM1Q15629 374 aa16.94■□□□□ 0.3
VARS-224ENST00000479051 KRTAP21-3Q3LHN1 58 aa16.94■□□□□ 0.3
VARS-224ENST00000479051 LIPKQ5VXJ0 399 aa16.94■□□□□ 0.3
VARS-224ENST00000479051 ZNF367Q7RTV3 350 aa16.94■□□□□ 0.3
VARS-224ENST00000479051 PRIMA1Q86XR5 153 aa16.94■□□□□ 0.3
VARS-224ENST00000479051 LY6G5BQ8NDX9 201 aa16.94■□□□□ 0.3
VARS-224ENST00000479051 PXT1Q8NFP0 134 aa16.94■□□□□ 0.3
VARS-224ENST00000479051 C8orf46Q8TAG6 207 aa16.94■□□□□ 0.3
VARS-224ENST00000479051 S100A13Q99584 98 aa16.94■□□□□ 0.3
VARS-224ENST00000479051 ELL3Q9HB65 397 aaPredicted RBP16.94■□□□□ 0.3
VARS-224ENST00000479051 HMG20AQ9NP66 347 aa16.94■□□□□ 0.3
VARS-224ENST00000479051 IGKV1-12A0A0C4DH73 117 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 GABRPO00591 440 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 IGKV1D-12P01611 117 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 FPR2P25090 351 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 PSMA1P25786 263 aaKnown RBP16.93■□□□□ 0.3
VARS-224ENST00000479051 MTNR1BP49286 362 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 COL10A1Q03692 680 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 TPBGQ13641 420 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 ZNF146Q15072 292 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 ACSM3Q53FZ2 586 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 RNF144BQ7Z419 303 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 KIR3DL3Q8N743 410 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 PPP1R35Q8TAP8 253 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 ORAI1Q96D31 301 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 WDFY2Q96P53 400 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 MGLLQ99685 303 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 PCGF1Q9BSM1 259 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 OCEL1Q9H607 264 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 NOX4Q9NPH5 578 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 ONECUT1Q9UBC0 465 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 NUP50Q9UKX7 468 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 KPTNQ9Y664 436 aa16.93■□□□□ 0.3
VARS-224ENST00000479051 A0A1W2PPH5 198 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 SH2D1BO14796 132 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 FSHBP01225 129 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 TK1P04183 234 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 PTGFRP43088 359 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 SNU13P55769 128 aaKnown RBP16.92■□□□□ 0.3
VARS-224ENST00000479051 ARF6P62330 175 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 BLMHQ13867 455 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 RSU1Q15404 277 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 CRIP3Q6Q6R5 217 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 BPIFB2Q8N4F0 458 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 OR5D13Q8NGL4 314 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 TBC1D15Q8TC07 691 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 TCF7L1Q9HCS4 588 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 EXOSC4Q9NPD3 245 aaKnown RBP16.92■□□□□ 0.3
VARS-224ENST00000479051 ACOT13Q9NPJ3 140 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 PCDHB16Q9NRJ7 776 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 GSTK1Q9Y2Q3 226 aa16.92■□□□□ 0.3
VARS-224ENST00000479051 TRAV8-7A0A075B6U6 113 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 MEGF11A6BM72 1044 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 K7N7A8 449 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 SFTPBP07988 381 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 CALCBP10092 127 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 CPEP16870 476 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 PDCD1Q15116 288 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 GDPD3Q7L5L3 318 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 CDH26Q8IXH8 852 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 FAM185AQ8N0U4 392 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 JAGN1Q8N5M9 183 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 NKAIN3Q8N8D7 197 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 ZNF418Q8TF45 676 aaPredicted RBP16.91■□□□□ 0.3
VARS-224ENST00000479051 SNX22Q96L94 193 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 METTL9Q9H1A3 318 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 IL36RNQ9UBH0 155 aa16.91■□□□□ 0.3
VARS-224ENST00000479051 TRAV40A0A0B4J280 105 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 TCF21O43680 179 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 MAS1P04201 325 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 GABRR1P24046 479 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 DUSP1P28562 367 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 OR3A4PP47883 348 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 RPL31P62899 125 aaKnown RBP16.9■□□□□ 0.3
VARS-224ENST00000479051 GPR157Q5UAW9 335 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 ELP2Q6IA86 826 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 UNQ9370/PRO34162Q6UXP9 181 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 CEACAM19Q7Z692 300 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 OR8H2Q8N162 312 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 FCGR1BQ92637 280 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 MS4A7Q9GZW8 240 aaPredicted RBP16.9■□□□□ 0.3
VARS-224ENST00000479051 SIRPDQ9H106 197 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 SLITRK2Q9H156 845 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 ING4Q9UNL4 249 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 LRRC42Q9Y546 428 aa16.9■□□□□ 0.3
VARS-224ENST00000479051 PIN1P1O15428 100 aa16.89■□□□□ 0.29
VARS-224ENST00000479051 ZNF780AO75290 641 aaPredicted RBP16.89■□□□□ 0.29
VARS-224ENST00000479051 ZNF737O75373 536 aa16.89■□□□□ 0.29
VARS-224ENST00000479051 CSTBP04080 98 aaKnown RBP16.89■□□□□ 0.29
VARS-224ENST00000479051 MMP9P14780 707 aa16.89■□□□□ 0.29
VARS-224ENST00000479051 BPIFB3P59826 476 aa16.89■□□□□ 0.29
VARS-224ENST00000479051 EMX1Q04741 257 aaPredicted RBP16.89■□□□□ 0.29
VARS-224ENST00000479051 KLF17Q5JT82 389 aaPredicted RBP16.89■□□□□ 0.29
VARS-224ENST00000479051 PHC2Q8IXK0 858 aa16.89■□□□□ 0.29
VARS-224ENST00000479051 CHST4Q8NCG5 386 aa16.89■□□□□ 0.29
VARS-224ENST00000479051 PHYHIPQ92561 330 aa16.89■□□□□ 0.29
VARS-224ENST00000479051 TMEM203Q969S6 136 aa16.89■□□□□ 0.29
VARS-224ENST00000479051 SUCNR1Q9BXA5 334 aa16.89■□□□□ 0.29
VARS-224ENST00000479051 IL36GQ9NZH8 169 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms