RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 IGLV3-19P01714 112 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 IGLV7-43P04211 117 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 HTR2BP41595 481 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 MAGEA3P43357 314 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 TUFMP49411 452 aaKnown RBP3.11□□□□□ -1.91
VPS50-212ENST00000476413 ACOT2P49753 483 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 XKP51811 444 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 SSX1Q16384 188 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 TMEM69Q5SWH9 247 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 FA2HQ7L5A8 372 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 SSX6Q7RTT6 188 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 TCAIMQ8N3R3 496 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 OR8G5Q8NG78 346 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 OR5H2Q8NGV7 314 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 BLNKQ8WV28 456 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 BIRC8Q96P09 236 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 PEBP4Q96S96 227 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 C1orf50Q9BV19 199 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 GOLPH3Q9H4A6 298 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 POMKQ9H5K3 350 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 TMBIM4Q9HC24 238 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 SDHAF3Q9NRP4 125 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 DNAJC27Q9NZQ0 273 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 ENPP5Q9UJA9 477 aa3.11□□□□□ -1.91
VPS50-212ENST00000476413 GOLGA8QA0A0J9YX86 632 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 C9JQL5 133 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 GYG2O15488 501 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 IGKV5-2P06315 115 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 GIMD1P0DJR0 217 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 SLC6A1P30531 599 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 GCLMP48507 274 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 TSPAN5P62079 268 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 ATP6AP1LQ52LC2 224 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 CYP4Z1Q86W10 505 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 LYPD1Q8N2G4 141 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 OR2K2Q8NGT1 345 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 ZMYND19Q96E35 227 aaPredicted RBP3.1□□□□□ -1.91
VPS50-212ENST00000476413 PPP1R36Q96LQ0 422 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 HMGXB4Q9UGU5 601 aa3.1□□□□□ -1.91
VPS50-212ENST00000476413 ZNF706Q9Y5V0 76 aaPredicted RBP3.1□□□□□ -1.91
VPS50-212ENST00000476413 ERICH4A6NGS2 130 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 VGLL3A8MV65 326 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 M0QX08 132 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 UPK2O00526 184 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 NEMFO60524 1076 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 CXorf1O96002 111 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 NRASP01111 189 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 HRASP01112 189 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 KRASP01116 189 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 CDK1P06493 297 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 IL12BP29460 328 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 GTF2H1P32780 548 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 LGALS7P47929 136 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 BAXQ07812 192 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 ZBTB6Q15916 424 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 ACTBL2Q562R1 376 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 AHSA2Q719I0 299 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 LINC00596Q86U02 117 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 OR4K17Q8NGC6 315 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 SEC22CQ9BRL7 303 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 THTPAQ9BU02 230 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 TREM1Q9NP99 234 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 IFT46Q9NQC8 304 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 OR2S2Q9NQN1 319 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 SLC22A7Q9Y694 548 aa3.09□□□□□ -1.91
VPS50-212ENST00000476413 RNASEK-C17orf49H0YIS7 233 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 K7EPK0 472 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 SLC37A4O43826 429 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 AQP5P55064 265 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 IL15RAQ13261 267 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 TRAM1Q15629 374 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 HBMQ6B0K9 141 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 GLYATQ6IB77 296 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 OR1P1Q8NH06 330 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 CCDC124Q96CT7 223 aaKnown RBP3.08□□□□□ -1.92
VPS50-212ENST00000476413 FXYD5Q96DB9 178 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 RTBDNQ9BSG5 229 aaPredicted RBP3.08□□□□□ -1.92
VPS50-212ENST00000476413 SRRQ9GZT4 340 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 LHX5Q9H2C1 402 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 TAC3Q9UHF0 121 aa3.08□□□□□ -1.92
VPS50-212ENST00000476413 MYBPHLA2RUH7 354 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 MYO1DO94832 1006 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 KCNK2O95069 426 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 LDOC1O95751 146 aaPredicted RBP3.07□□□□□ -1.92
VPS50-212ENST00000476413 FADS2O95864 444 aaKnown RBP3.07□□□□□ -1.92
VPS50-212ENST00000476413 IGKV1-17P01599 117 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 CECR9P0C854 216 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 RNASE2P10153 161 aaKnown RBP3.07□□□□□ -1.92
VPS50-212ENST00000476413 IMPA1P29218 277 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 TSPOP30536 169 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 TTPAP49638 278 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 OR2B6P58173 313 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 CD164Q04900 197 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 XRCC4Q13426 336 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 TPBGQ13641 420 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 TMEM241Q24JQ0 296 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 CEACAM21Q3KPI0 293 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 MRPL2Q5T653 305 aaKnown RBP3.07□□□□□ -1.92
VPS50-212ENST00000476413 GALNT10Q86SR1 603 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 SGPP2Q8IWX5 399 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms