RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NUFIP1Q9UHK0 495 aaKnown RBP11.22□□□□□ -0.61
CCDC78-209ENST00000474647 TSSC4Q9Y5U2 329 aaPredicted RBP11.22□□□□□ -0.61
CCDC78-209ENST00000474647 IGHV2-26A0A0B4J1V2 119 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 FAM230AA0A1W2PPH8 454 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 ZAR1LA6NP61 321 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 LOC110117498-PIK3R3F6TDL0 507 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 H0YJX3 145 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 H3BUI4 141 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 CLIC3O95833 236 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 TTRP02766 147 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 CD24P25063 80 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 EPHA2P29317 976 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 VHLP40337 213 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 DYNLT3P51808 116 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 CDK5Q00535 292 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 PTGES3Q15185 160 aaKnown RBP11.21□□□□□ -0.61
CCDC78-209ENST00000474647 BCL2L15Q5TBC7 163 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 LCN1P1Q5VSP4 162 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 TMEM236Q5W0B7 351 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 DEGS2Q6QHC5 323 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 TCF23Q7RTU1 214 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 ZNF679Q8IYX0 411 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 TPRX1Q8N7U7 411 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 OR4X2Q8NGF9 303 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 MYDGFQ969H8 173 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 ITFG2Q969R8 447 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 CLEC7AQ9BXN2 247 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 COPS3Q9UNS2 423 aa11.21□□□□□ -0.61
CCDC78-209ENST00000474647 H3BSH0 61 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 ZNF254O75437 659 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 LPLP06858 475 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 CHRM2P08172 466 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 MPZP25189 248 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 POLR2IP36954 125 aaKnown RBP11.2□□□□□ -0.62
CCDC78-209ENST00000474647 AQP4P55087 323 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 ZIK1Q3SY52 487 aaPredicted RBP11.2□□□□□ -0.62
CCDC78-209ENST00000474647 ABCA11PQ4W5N1 156 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 TCTEX1D4Q5JR98 221 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 MINOS1Q5TGZ0 78 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 SLX4IPQ5VYV7 408 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 PLEKHG7Q6ZR37 379 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 TRAPPC6BQ86SZ2 158 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 OR8H2Q8N162 312 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 DPF1Q92782 380 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 AKR1E2Q96JD6 320 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 TEX12Q9BXU0 123 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 CHST6Q9GZX3 395 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 PLEKHA1Q9HB21 404 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 SESN1Q9Y6P5 492 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 MINOS1-NBL1R4GNA1 71 aa11.2□□□□□ -0.62
CCDC78-209ENST00000474647 hADV38S2A0JD32 116 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 SH2D7A6NKC9 451 aaPredicted RBP11.19□□□□□ -0.62
CCDC78-209ENST00000474647 F8VVB4 439 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 F8VWA3 439 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 ZNF737O75373 536 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 DUS4LO95620 317 aaKnown RBP11.19□□□□□ -0.62
CCDC78-209ENST00000474647 CXCR4P61073 352 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 ERVK11-1P61568 191 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 ROM1Q03395 351 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 IL24Q13007 206 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 IL18R1Q13478 541 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 SNAPC1Q16533 368 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 ODF4Q2M2E3 257 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 C9orf152Q5JTZ5 239 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 TMEM42Q69YG0 159 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 C12orf73Q69YU5 71 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 C10orf99Q6UWK7 81 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 C16orf82Q7Z2V1 217 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 ASB17Q8WXJ9 295 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 SLAMF9Q96A28 289 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 HRASLS5Q96KN8 279 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 CEP19Q96LK0 163 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 WWC2-AS2Q96NR7 200 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 CNN2Q99439 309 aaKnown RBP11.19□□□□□ -0.62
CCDC78-209ENST00000474647 SLC25A33Q9BSK2 321 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 PRRG3Q9BZD7 231 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 PKIBQ9C010 78 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 TMEM133Q9H2Q1 129 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 MOB1AQ9H8S9 216 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 INPP5EQ9NRR6 644 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 FAM118AQ9NWS6 357 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 TVP23BQ9NYZ1 205 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 OR52A1Q9UKL2 312 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 TMEM14AQ9Y6G1 99 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 V9GYS6 101 aa11.19□□□□□ -0.62
CCDC78-209ENST00000474647 FAM172BPA6NC97 362 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 CCDC182A6NF36 153 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 SLC16A6O15403 523 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 MAGEB4O15481 346 aaPredicted RBP11.18□□□□□ -0.62
CCDC78-209ENST00000474647 IGHA1P01876 353 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 GABRR1P24046 479 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 HTR1DP28221 377 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 MEF2CQ06413 473 aaPredicted RBP11.18□□□□□ -0.62
CCDC78-209ENST00000474647 GRK1Q15835 563 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 IZUMO2Q6UXV1 221 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 OR14K1Q8NGZ2 314 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 EMG1Q92979 244 aaKnown RBP11.18□□□□□ -0.62
CCDC78-209ENST00000474647 SNX22Q96L94 193 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 APOL4Q9BPW4 351 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 ZNF649Q9BS31 505 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms