RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 HIPK2Q9H2X6 1198 aa7.9□□□□□ -1.14
HDAC3-203ENST00000467533 LIN7CQ9NUP9 197 aaKnown RBP7.9□□□□□ -1.14
HDAC3-203ENST00000467533 AMMECR1Q9Y4X0 333 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-203ENST00000467533 ENPP4Q9Y6X5 453 aa7.9□□□□□ -1.14
HDAC3-203ENST00000467533 KMT2AQ03164 3969 aa7.9□□□□□ -1.15
HDAC3-203ENST00000467533 TRGV10A0A0A0MS01 117 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 IGHA1P01876 353 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 MED14OSP0DP75 135 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 GDNFP39905 211 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 SLX4IPQ5VYV7 408 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 TMEM65Q6PI78 240 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 TGIF2LXQ8IUE1 241 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 ERI1Q8IV48 349 aaKnown RBP7.89□□□□□ -1.15
HDAC3-203ENST00000467533 SLC37A3Q8NCC5 494 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 OR52J3Q8NH60 311 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 MYOZ3Q8TDC0 251 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 KCTD7Q96MP8 289 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 AMELYQ99218 206 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 RSRP1Q9BUV0 290 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 OR51J1Q9H342 316 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 CHCHD3Q9NX63 227 aaKnown RBP7.89□□□□□ -1.15
HDAC3-203ENST00000467533 FAM32AQ9Y421 112 aaKnown RBP7.89□□□□□ -1.15
HDAC3-203ENST00000467533 CEPT1Q9Y6K0 416 aa7.89□□□□□ -1.15
HDAC3-203ENST00000467533 ABCA13Q86UQ4 5058 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 FAM183AA6NL82 134 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 LINC01619G3V211 115 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 FXYD1O00168 92 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 GSC2O15499 205 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 BRI3O95415 125 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 NRASP01111 189 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 KIR3DL2P43630 455 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 P2RX3P56373 397 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 ZP1P60852 638 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 PSMA6P60900 246 aaKnown RBP7.88□□□□□ -1.15
HDAC3-203ENST00000467533 VSNL1P62760 191 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 RIPPLY1Q0D2K3 151 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 KPNB1Q14974 876 aaKnown RBP7.88□□□□□ -1.15
HDAC3-203ENST00000467533 LCN1P1Q5VSP4 162 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 ASRGL1Q7L266 308 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 ANKRD13BQ86YJ7 626 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 PGAM4Q8N0Y7 254 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 ZNF491Q8N8L2 437 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 OR52L1Q8NGH7 329 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 OR52N4Q8NGI2 321 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 OR4D6Q8NGJ1 314 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 TSPEARQ8WU66 669 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 ITFG2Q969R8 447 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 C7orf26Q96N11 449 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 INTS14Q96SY0 518 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 PARD6BQ9BYG5 372 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 ALX4Q9H161 411 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-203ENST00000467533 DCAF13Q9NV06 445 aaKnown RBP7.88□□□□□ -1.15
HDAC3-203ENST00000467533 NKIRAS1Q9NYS0 192 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 DNAJB9Q9UBS3 223 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 GLS2Q9UI32 602 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 ENPP5Q9UJA9 477 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.88□□□□□ -1.15
HDAC3-203ENST00000467533 STUB1Q9UNE7 303 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 PIGLQ9Y2B2 252 aa7.88□□□□□ -1.15
HDAC3-203ENST00000467533 MGST3O14880 152 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 INMTO95050 263 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 HAND1O96004 215 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 OR5H8P0DN80 308 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 CLUP10909 449 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 SPI1P17947 270 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 MPZP25189 248 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 NFYBP25208 207 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 PTGFRP43088 359 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 RAB7AP51149 207 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 ERVK11-1P61568 191 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 CRMP1Q14194 572 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 TNFAIP8L3Q5GJ75 292 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 KRT74Q7RTS7 529 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 GTSCR1Q86UQ5 136 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 OR8H3Q8N146 312 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 OR9G1Q8NH87 305 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 RNF166Q96A37 237 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-203ENST00000467533 RASL11BQ9BPW5 248 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 NABP2Q9BQ15 211 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 HSPB9Q9BQS6 159 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 KLK15Q9H2R5 256 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 EGLN3Q9H6Z9 239 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 GPR173Q9NS66 373 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 TAS2R3Q9NYW6 316 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 SLC7A11Q9UPY5 501 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 MUC4Q99102 2169 aa7.87□□□□□ -1.15
HDAC3-203ENST00000467533 TNCP24821 2201 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 PQLC2LA1A4F0 135 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 F8VVB4 439 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 F8VWA3 439 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 MPZL2O60487 215 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 DIRAS1O95057 198 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 IGLV1-51P01701 117 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 LYNP07948 512 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 ATP6V1B1P15313 513 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 BLVRAP53004 296 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 IL24Q13007 206 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 MADCAM1Q13477 382 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 DIAPH2-AS1Q14236 149 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 UTF1Q5T230 341 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms