RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 CST11Q9H112 138 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 METTL9Q9H1A3 318 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 LPAR5Q9H1C0 372 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 CXXC4Q9H2H0 198 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 CA10Q9NS85 328 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 RHBDL2Q9NX52 303 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 IL19Q9UHD0 177 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 PLEKHA6Q9Y2H5 1048 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 MRPS28Q9Y2Q9 187 aaKnown RBP4.64□□□□□ -1.67
VPS41-211ENST00000466017 POLDIP2Q9Y2S7 368 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 V9GYH0 126 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 PKD1L2Q7Z442 2459 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 PIEZO2Q9H5I5 2752 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 CADP27708 2225 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 DIDO1Q9BTC0 2240 aaKnown RBP4.63□□□□□ -1.67
VPS41-211ENST00000466017 FAM230AA0A1W2PPH8 454 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 SMIM30A4D0T7 59 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 DEFB108AA8MXU0 73 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 FAM25AB3EWG3 89 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 FAM25CB3EWG5 89 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 FAM25GB3EWG6 89 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 B5MCH6 92 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 B9A039 149 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 E7EQL1 145 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 ATP6V1G2-DDX39BF2Z307 99 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 J3QT63 122 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 IFNL4K9M1U5 179 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 ABCD4O14678 606 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 MLNRO43193 412 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 TIMM8AO60220 97 aaPredicted RBP4.63□□□□□ -1.67
VPS41-211ENST00000466017 CYB5AP00167 134 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 EIF4EP06730 217 aaKnown RBP4.63□□□□□ -1.67
VPS41-211ENST00000466017 TMEM225BP0DP42 221 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 GTF2F2P13984 249 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 CA6P23280 308 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 CPT2P23786 658 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 PTH2RP49190 550 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 TMEM50BP56557 158 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 CLDN12P56749 244 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 FGF12P61328 243 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 ERVK11-1P61568 191 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 RPS27AP62979 156 aaKnown RBP4.63□□□□□ -1.67
VPS41-211ENST00000466017 BSPH1Q075Z2 132 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 MAB21L1Q13394 359 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 UNC119Q13432 240 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 DCTN2Q13561 401 aaKnown RBP4.63□□□□□ -1.67
VPS41-211ENST00000466017 IL13RA2Q14627 380 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 OR8G1Q15617 311 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 ADIPOQQ15848 244 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 ZNF79Q15937 498 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 PNLIPRP3Q17RR3 467 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 ZNF181Q2M3W8 571 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 MPV17LQ2QL34 196 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 BEAN1Q3B7T3 259 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 ALKBH6Q3KRA9 238 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 ZNF260Q3ZCT1 412 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 TMEM255AQ5JRV8 349 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 AWAT2Q6E213 333 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 CNIH2Q6PI25 160 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 SLC22A25Q6T423 547 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 Q6ZR03 302 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 C1QL2Q7Z5L3 287 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 LINC00596Q86U02 117 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A1Q86YD7 464 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 LAX1Q8IWV1 398 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 C11orf53Q8IXP5 236 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 OR4M1Q8NGD0 313 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 OR56B1Q8NGI3 324 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 OR8S1Q8NH09 359 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 OR51F2Q8NH61 342 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 LINC01560Q8TB33 94 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 TNFAIP8L1Q8WVP5 186 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 AQP3Q92482 292 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 GTF3AQ92664 365 aaKnown RBP4.63□□□□□ -1.67
VPS41-211ENST00000466017 FAM46BQ96A09 425 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 SDHCQ99643 169 aaPredicted RBP4.63□□□□□ -1.67
VPS41-211ENST00000466017 MRPL37Q9BZE1 423 aaKnown RBP4.63□□□□□ -1.67
VPS41-211ENST00000466017 FGF23Q9GZV9 251 aaPredicted RBP4.63□□□□□ -1.67
VPS41-211ENST00000466017 RASL12Q9NYN1 266 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 TAAR3PQ9P1P4 343 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 EXTL2Q9UBQ6 330 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 ZNF107Q9UII5 783 aaPredicted RBP4.63□□□□□ -1.67
VPS41-211ENST00000466017 HSF4Q9ULV5 492 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 ING4Q9UNL4 249 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 RNF115Q9Y4L5 304 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 CHD8Q9HCK8 2581 aa4.63□□□□□ -1.67
VPS41-211ENST00000466017 ATMQ13315 3056 aa4.62□□□□□ -1.67
VPS41-211ENST00000466017 HIVEP3Q5T1R4 2406 aa4.62□□□□□ -1.67
VPS41-211ENST00000466017 A0A0B4J203 849 aa4.62□□□□□ -1.67
VPS41-211ENST00000466017 IGKV1-12A0A0C4DH73 117 aa4.62□□□□□ -1.67
VPS41-211ENST00000466017 PLSCR5A0PG75 271 aa4.62□□□□□ -1.67
VPS41-211ENST00000466017 C17orf100A8MU93 164 aa4.62□□□□□ -1.67
VPS41-211ENST00000466017 GABARAPH6UMI1 98 aa4.62□□□□□ -1.67
VPS41-211ENST00000466017 UPK1BO75841 260 aa4.62□□□□□ -1.67
VPS41-211ENST00000466017 LHBP01229 141 aa4.62□□□□□ -1.67
VPS41-211ENST00000466017 IGKV1D-12P01611 117 aa4.62□□□□□ -1.67
VPS41-211ENST00000466017 CSTBP04080 98 aaKnown RBP4.62□□□□□ -1.67
VPS41-211ENST00000466017 OR4A8P0C604 315 aa4.62□□□□□ -1.67
VPS41-211ENST00000466017 PGA5P0DJD9 388 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms