RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 HMGN1P05114 100 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 ERP29P30040 261 aaKnown RBP8.59□□□□□ -1.03
CBX3-205ENST00000462165 CDK5Q00535 292 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 APOFQ13790 326 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 GK3PQ14409 553 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 GINS1Q14691 196 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 GRK1Q15835 563 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 SNAPC1Q16533 368 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 CASC10Q5T4H9 136 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 SLX4IPQ5VYV7 408 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 OR52W1Q6IF63 320 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 C18orf65Q6ZTR6 163 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 ZNF329Q86UD4 541 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 OR52N4Q8NGI2 321 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 GIPC3Q8TF64 312 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 ASB17Q8WXJ9 295 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 FEVQ99581 238 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 CHST6Q9GZX3 395 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 MOB1AQ9H8S9 216 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 PAPOLBQ9NRJ5 636 aaKnown RBP8.59□□□□□ -1.03
CBX3-205ENST00000462165 UBE2J1Q9Y385 318 aaPredicted RBP8.59□□□□□ -1.03
CBX3-205ENST00000462165 PCDHGB5Q9Y5G0 923 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 TMEM14AQ9Y6G1 99 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 STARD9Q9P2P6 4700 aa8.59□□□□□ -1.03
CBX3-205ENST00000462165 HYDINQ4G0P3 5121 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 FAM230AA0A1W2PPH8 454 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 ARRDC5A6NEK1 342 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 A6NIN4 97 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 LOC110117498-PIK3R3F6TDL0 507 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 MGST3O14880 152 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 PSPNO60542 156 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 HAND1O96004 215 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 MRPL3P09001 348 aaKnown RBP8.58□□□□□ -1.04
CBX3-205ENST00000462165 GABRR1P24046 479 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 CD34P28906 385 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 GP2P55259 537 aaKnown RBP8.58□□□□□ -1.04
CBX3-205ENST00000462165 ZNF91Q05481 1191 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 BAIAP2L2Q6UXY1 529 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 HEPN1Q6WQI6 88 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 EGFL6Q8IUX8 553 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 ENTHD1Q8IYW4 607 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 ELMOD2Q8IZ81 293 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 DEFB107AQ8IZN7 70 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 KLHL30-AS1Q8NEE0 82 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 TRMT10AQ8TBZ6 339 aaKnown RBP8.58□□□□□ -1.04
CBX3-205ENST00000462165 CHPT1Q8WUD6 406 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 SLAMF9Q96A28 289 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 CREB3L1Q96BA8 519 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 CADM1Q9BY67 442 aaKnown RBP8.58□□□□□ -1.04
CBX3-205ENST00000462165 TTTY10Q9BZA0 68 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 OR52A1Q9UKL2 312 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 IKZF2Q9UKS7 526 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 COPS3Q9UNS2 423 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 SLC7A11Q9UPY5 501 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 MOB4Q9Y3A3 225 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 HSPE1-MOB4S4R3N1 261 aa8.58□□□□□ -1.04
CBX3-205ENST00000462165 IGKV1-27A0A075B6S5 117 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 FAM90A18PA6NE21 464 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 FAM90A16PA6NEW6 464 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 FAM90A20PA6NIJ5 464 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 FAM90A9PA6NNJ1 464 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 FAM90A12PA8MX19 464 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 FAM90A5PA8MXJ8 464 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 NUDT19A8MXV4 375 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 OOSP1A8MZH6 123 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 LY6LH3BQJ8 138 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 BUB1B-PAK6H3BSN5 160 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 FAM90A15PP0C7V4 464 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 FAM90A13PP0C7W8 464 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 FAM90A14PP0C7W9 464 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 FAM90A24PP0C7X0 464 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 CEACAM3P40198 252 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 OR3A4PP47883 348 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 P2RX3P56373 397 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 CBX1P83916 185 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 ZNF146Q15072 292 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 HLA-DRB5Q30154 266 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 BCL2L15Q5TBC7 163 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 PRAMEF5Q5TYX0 476 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 CCDC144NLQ6NUI1 221 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 C16orf89Q6UX73 402 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 TRAPPC6BQ86SZ2 158 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 THNSL2Q86YJ6 484 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 Q8IYB0 196 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 COMMD1Q8N668 190 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 MUC7Q8TAX7 377 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 CORO2AQ92828 525 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 EMG1Q92979 244 aaKnown RBP8.57□□□□□ -1.04
CBX3-205ENST00000462165 NOL4LQ96MY1 436 aaPredicted RBP8.57□□□□□ -1.04
CBX3-205ENST00000462165 ELAC2Q9BQ52 826 aaKnown RBP8.57□□□□□ -1.04
CBX3-205ENST00000462165 GAL3ST2Q9H3Q3 398 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 NDE1Q9NXR1 346 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 TAS2R3Q9NYW6 316 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 IL36RNQ9UBH0 155 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 GTF2A1LQ9UNN4 478 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 R4GMQ9 66 aa8.57□□□□□ -1.04
CBX3-205ENST00000462165 CSMD3Q7Z407 3707 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 TRGV10A0A0A0MS01 117 aa8.56□□□□□ -1.04
CBX3-205ENST00000462165 FAM172BPA6NC97 362 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms