RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 FAM19A1Q7Z5A9 133 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 DAZ4Q86SG3 579 aaKnown RBP1.84□□□□□ -2.11
VCL-203ENST00000461383 PRNTQ86SH4 94 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 LINC00596Q86U02 117 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SGPP2Q8IWX5 399 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 ZNF561Q8N587 486 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 ST20-AS1Q8NBB2 130 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SLC26A10Q8NG04 563 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SCGB1C1Q8TD33 95 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 TWIST2Q8WVJ9 160 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 PPP1R36Q96LQ0 422 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 YPEL4Q96NS1 127 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SERPINB11Q96P15 392 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SPACA5Q96QH8 159 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 PITX2Q99697 317 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 MED10Q9BTT4 135 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SCRT1Q9BWW7 348 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 MS4A8Q9BY19 250 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 TSGA10Q9BZW7 698 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 NDEL1Q9GZM8 345 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SLC25A31Q9H0C2 315 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 DSN1Q9H410 356 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 SND1-IT1Q9HBX3 110 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 DAZ1Q9NQZ3 744 aaKnown RBP1.84□□□□□ -2.11
VCL-203ENST00000461383 ENPP5Q9UJA9 477 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 USH1CQ9Y6N9 552 aa1.84□□□□□ -2.11
VCL-203ENST00000461383 A0A1W2PRG6 482 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 OR6C70A6NIJ9 312 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 CD300LBA8K4G0 201 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 CLDN34H7C241 214 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 PLPP3O14495 311 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 FABP7O15540 132 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 MYO1DO94832 1006 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 TNFAIP8O95379 198 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 LHBP01229 141 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 IGHV1-46P01743 117 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 IGLV7-43P04211 117 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 MLNP12872 115 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 NQO2P16083 231 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 ZNF14P17017 642 aaPredicted RBP1.83□□□□□ -2.12
VCL-203ENST00000461383 SYT1P21579 422 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 UGT2B10P36537 528 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 TGFBR1P36897 503 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 GCLMP48507 274 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 PRKCDQ05655 676 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 MEF2CQ06413 473 aaPredicted RBP1.83□□□□□ -2.12
VCL-203ENST00000461383 DMTNQ08495 405 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 OR4D1Q15615 310 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 CLEC12AQ5QGZ9 265 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 ZNF678Q5SXM1 525 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 ERICH5Q6P6B1 374 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 SPINT4Q6UDR6 99 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 GALNT10Q86SR1 603 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 C17orf78Q8N4C9 275 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 SPICQ8N5J4 248 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 OR2AE1Q8NHA4 323 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 DEDD2Q8WXF8 326 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 RBPMSQ93062 196 aaKnown RBP1.83□□□□□ -2.12
VCL-203ENST00000461383 FMC1Q96HJ9 113 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 ACBD6Q9BR61 282 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 ING2Q9H160 280 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 ASB7Q9H672 318 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 METTL8Q9H825 291 aaKnown RBP1.83□□□□□ -2.12
VCL-203ENST00000461383 INIPQ9NRY2 104 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 CD300AQ9UGN4 299 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 HMGXB4Q9UGU5 601 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 TAC3Q9UHF0 121 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 CYB5R1Q9UHQ9 305 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 NRCAMQ92823 1304 aa1.83□□□□□ -2.12
VCL-203ENST00000461383 PRR14LQ5THK1 2151 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 TRPC5OSA6NMA1 111 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 RNASEK-C17orf49H0YIS7 233 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 H3BP45 60 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 I3L4J1 428 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 K7EM74 188 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 UPK1AO00322 258 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 CRXO43186 299 aaPredicted RBP1.82□□□□□ -2.12
VCL-203ENST00000461383 SHOX2O60902 331 aaPredicted RBP1.82□□□□□ -2.12
VCL-203ENST00000461383 HLA-DMAP28067 261 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 IMPA1P29218 277 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 GTF2H1P32780 548 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 CD151P48509 253 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 TGM4P49221 684 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 GDI2P50395 445 aaKnown RBP1.82□□□□□ -2.12
VCL-203ENST00000461383 RBX1P62877 108 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 HBG1P69891 147 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 HBG2P69892 147 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 TPBGQ13641 420 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 SYCP1Q15431 976 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 CEACAM21Q3KPI0 293 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 SP6Q3SY56 376 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 Q499Y3 187 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 CLLU1OSQ5K130 101 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 KHDRBS2Q5VWX1 349 aaKnown RBP1.82□□□□□ -2.12
VCL-203ENST00000461383 IGFL1Q6UW32 110 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 FAM131AQ6UXB0 335 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 Q6ZT83 130 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
VCL-203ENST00000461383 SSX7Q7RTT5 188 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 MRPL52Q86TS9 123 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms