RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 MAGEA13PA6NCF6 341 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 K7N7A8 449 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 M0R1W7 72 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 PIN1P1O15428 100 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 TCF21O43680 179 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 HAND1O96004 215 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 TK1P04183 234 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 CHRM2P08172 466 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 NDUFB7P17568 137 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 HILS1P60008 231 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 PPP3R1P63098 170 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 COL10A1Q03692 680 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 GPR50Q13585 617 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 METTL11BQ5VVY1 283 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 ELP2Q6IA86 826 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 METAP1DQ6UB28 335 aaPredicted RBP11.66□□□□□ -0.54
HDAC4-205ENST00000454542 C17orf107Q6ZR85 190 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 LYPD6Q86Y78 171 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 Q8N7P7 452 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 ORAI1Q96D31 301 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 TMEM138Q9NPI0 162 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 ANK2Q01484 3957 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 TMEM82A0PJX8 343 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 TOX4O94842 621 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 PRKACAP17612 351 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 BDKRB2P30411 391 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 MTNR1BP49286 362 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 BPIFB3P59826 476 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 ARF6P62330 175 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 TPBGQ13641 420 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 PDCD1Q15116 288 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 MED22Q15528 200 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 DDI2Q5TDH0 399 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 FIP1L1Q6UN15 594 aaKnown RBP11.65□□□□□ -0.54
HDAC4-205ENST00000454542 UNQ9370/PRO34162Q6UXP9 181 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 C1orf122Q6ZSJ8 110 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 OR8H2Q8N162 312 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 H1FXQ92522 213 aaKnown RBP11.65□□□□□ -0.54
HDAC4-205ENST00000454542 TNFRSF14Q92956 283 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 ZNF48Q96MX3 618 aaPredicted RBP11.65□□□□□ -0.54
HDAC4-205ENST00000454542 SUCNR1Q9BXA5 334 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 C19orf12Q9NSK7 152 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 IL36GQ9NZH8 169 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 FOXJ3Q9UPW0 622 aa11.65□□□□□ -0.54
HDAC4-205ENST00000454542 CENPVL3A0A0U1RRI6 287 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 PSPNO60542 156 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 MRPS14O60783 128 aaKnown RBP11.64□□□□□ -0.55
HDAC4-205ENST00000454542 VENTXO95231 258 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 MAPK3P27361 379 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-205ENST00000454542 OR3A4PP47883 348 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 BMXP51813 675 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 GP2P55259 537 aaKnown RBP11.64□□□□□ -0.55
HDAC4-205ENST00000454542 MLLT11Q13015 90 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-205ENST00000454542 KRTAP24-1Q3LI83 254 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 TCF23Q7RTU1 214 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 VMO1Q7Z5L0 202 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 BPIFB2Q8N4F0 458 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 MS4A15Q8N5U1 240 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 OR51T1Q8NGJ9 327 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 ZNF418Q8TF45 676 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-205ENST00000454542 TNFAIP8L1Q8WVP5 186 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 SNX22Q96L94 193 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 MDFIQ99750 246 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 PCGF1Q9BSM1 259 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 PRDM13Q9H4Q3 707 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 Q9H521 79 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 ONECUT1Q9UBC0 465 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 CKLFQ9UBR5 152 aa11.64□□□□□ -0.55
HDAC4-205ENST00000454542 MAGEB3O15480 346 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 INMTO95050 263 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 FPR2P25090 351 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 LMO1P25800 156 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 ZNF93P35789 620 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-205ENST00000454542 OR3A1P47881 315 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 CAPZA1P52907 286 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 DLX6P56179 175 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 ZNF273Q14593 569 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 IL13RA2Q14627 380 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 NHLRC3Q5JS37 347 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 GPR157Q5UAW9 335 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 Q6P435 159 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 ZNF367Q7RTV3 350 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 CDH26Q8IXH8 852 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 CMTM4Q8IZR5 234 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 BCL6BQ8N143 479 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-205ENST00000454542 NKAIN3Q8N8D7 197 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 ASCC1Q8N9N2 400 aaKnown RBP11.63□□□□□ -0.55
HDAC4-205ENST00000454542 ZFAND2BQ8WV99 257 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 UFD1Q92890 307 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 NKX3-1Q99801 234 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-205ENST00000454542 EXOSC4Q9NPD3 245 aaKnown RBP11.63□□□□□ -0.55
HDAC4-205ENST00000454542 NOX4Q9NPH5 578 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 ESM1Q9NQ30 184 aa11.63□□□□□ -0.55
HDAC4-205ENST00000454542 SF3B6Q9Y3B4 125 aaKnown RBP11.63□□□□□ -0.55
HDAC4-205ENST00000454542 IGHV3OR16-10A0A075B7F0 116 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 IGHV1-69DA0A0B4J2H0 117 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 A0A1W2PQ09 198 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 OR2H2O95918 312 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 IGHV1-69P01742 117 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 CSN2P05814 226 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms