RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 IGHV4-39P01824 125 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 LYNX1P0DP58 116 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 CPT2P23786 658 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 CD80P33681 288 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 S100A5P33763 92 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 GMFBP60983 142 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 ZNF146Q15072 292 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 TEX36Q5VZQ5 186 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 FIP1L1Q6UN15 594 aaKnown RBP11.8□□□□□ -0.52
SHMT2-203ENST00000449049 LINC00596Q86U02 117 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 METTL21EPA6NDL7 271 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A10PA6NDY2 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A18PA6NE21 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A16PA6NEW6 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A20PA6NIJ5 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A8PA6NJQ4 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A7PA6NKC0 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A22PA8MWA6 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A12PA8MX19 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A5PA8MXJ8 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A23PA8MXZ1 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FSTL3O95633 263 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A15PP0C7V4 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A13PP0C7W8 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A14PP0C7W9 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A24PP0C7X0 464 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 TNFSF8P32971 234 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 FAM201AQ5SY85 155 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 BOLLQ8N9W6 283 aaKnown RBP11.79□□□□□ -0.52
SHMT2-203ENST00000449049 SEH1LQ96EE3 360 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 ATG5Q9H1Y0 275 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 NLKQ9UBE8 527 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 PLEKHA6Q9Y2H5 1048 aa11.79□□□□□ -0.52
SHMT2-203ENST00000449049 GCN1Q92616 2671 aaKnown RBP11.79□□□□□ -0.52
SHMT2-203ENST00000449049 A0A0A6YYH2 397 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 A6NJ64 397 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 FOXI3A8MTJ6 420 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-203ENST00000449049 FAM25AB3EWG3 89 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 FAM25CB3EWG5 89 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 FAM25GB3EWG6 89 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 GEMIN2O14893 280 aaKnown RBP11.78□□□□□ -0.52
SHMT2-203ENST00000449049 SCGNO76038 276 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 MUC1P15941 1255 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-203ENST00000449049 MPV17LQ2QL34 196 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 S100A16Q96FQ6 103 aaKnown RBP11.78□□□□□ -0.52
SHMT2-203ENST00000449049 GAL3ST1Q99999 423 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 NUDT16L1Q9BRJ7 211 aaKnown RBP11.78□□□□□ -0.52
SHMT2-203ENST00000449049 GSX2Q9BZM3 304 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 CHODLQ9H9P2 273 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 SEBOXQ9HB31 216 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-203ENST00000449049 MYOZ1Q9NP98 299 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-203ENST00000449049 DNAJB11Q9UBS4 358 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 EDARQ9UNE0 448 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 DCHS2Q6V1P9 2916 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 PPIAL4EA0A075B759 164 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 OOEPA6NGQ2 149 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 PPIAL4DF5H284 164 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 RAB27BO00194 218 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 LGALS8O00214 317 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 CHRM2P08172 466 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 PPIAL4FP0DN26 164 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 PTH2RP49190 550 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 VEGFCP49767 419 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 SNU13P55769 128 aaKnown RBP11.78□□□□□ -0.52
SHMT2-203ENST00000449049 IFITM3Q01628 133 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 TAF9Q16594 264 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 MOGAT2Q3SYC2 334 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 SFRP4Q6FHJ7 346 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-203ENST00000449049 CNIH2Q6PI25 160 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 CCDC190Q86UF4 302 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 OR56B1Q8NGI3 324 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 IFT22Q9H7X7 185 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 BARX1Q9HBU1 254 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-203ENST00000449049 RABL2AQ9UBK7 228 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-203ENST00000449049 PPIAL4AQ9Y536 164 aa11.78□□□□□ -0.52
SHMT2-203ENST00000449049 IGHV3OR15-7A0A075B7D8 119 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 PSG2P11465 335 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 GABRR1P24046 479 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 CDK2P24941 298 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 PITPNBP48739 271 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 MICBQ29980 383 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 STUMQ69YW2 141 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 SIGIRRQ6IA17 410 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 RAB12Q6IQ22 244 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 METAP1DQ6UB28 335 aaPredicted RBP11.77□□□□□ -0.52
SHMT2-203ENST00000449049 C19orf18Q8NEA5 215 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 OR4M1Q8NGD0 313 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 OR10R2Q8NGX6 335 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 DIRAS2Q96HU8 199 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 ZNF581Q9P0T4 197 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 EXTL2Q9UBQ6 330 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 ZNF222Q9UK12 451 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 WIPI2Q9Y4P8 454 aa11.77□□□□□ -0.52
SHMT2-203ENST00000449049 FBN2P35556 2912 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 IGKV1D-17A0A075B6S4 117 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 TRAV38-1A0A0B4J264 116 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 OR2AT4A6NND4 320 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 SOCS1O15524 211 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 XRCC3O43542 346 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 ZNF205O95201 554 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms