RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 COL6A6A6NMZ7 2263 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 PKD1L2Q7Z442 2459 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 ZNF850A8MQ14 1090 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 F8VVB4 439 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 F8VWA3 439 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 GATCO43716 136 aaKnown RBP8.2□□□□□ -1.1
CUX1-206ENST00000437600 DUS4LO95620 317 aaKnown RBP8.2□□□□□ -1.1
CUX1-206ENST00000437600 NGFP01138 241 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 CCL1P22362 96 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 PSMB6P28072 239 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 MEOX1P50221 254 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 PABPC1L2AQ5JQF8 200 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 RNFT1Q5M7Z0 435 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 PDSS1Q5T2R2 415 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 MRPS24Q96EL2 167 aaKnown RBP8.2□□□□□ -1.1
CUX1-206ENST00000437600 SULT4A1Q9BR01 284 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 SMIM3Q9BZL3 60 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 C12orf49Q9H741 205 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 TMEM38BQ9NVV0 291 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 MED9Q9NWA0 146 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 TAS2R3Q9NYW6 316 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 IL36RNQ9UBH0 155 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 LHX6Q9UPM6 363 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 GJE1A6NN92 205 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 RAB32Q13637 225 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 MPPED2Q15777 294 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 ZNF239Q16600 458 aaKnown RBP8.2□□□□□ -1.1
CUX1-206ENST00000437600 PHLDA2Q53GA4 152 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 TMED6Q8WW62 240 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 MARS2Q96GW9 593 aaKnown RBP8.2□□□□□ -1.1
CUX1-206ENST00000437600 ADGRG7Q96K78 797 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 ADAT1Q9BUB4 502 aaKnown RBP8.2□□□□□ -1.1
CUX1-206ENST00000437600 TMEM231Q9H6L2 316 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 ABI3Q9P2A4 366 aa8.2□□□□□ -1.1
CUX1-206ENST00000437600 MRPL33O75394 65 aaKnown RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 SCGB1D2O95969 90 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 NRASP01111 189 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 CD8AP01732 235 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 GSTP1P09211 210 aaKnown RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 PRF1P14222 555 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 FKBP2P26885 142 aaKnown RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 OTX1P32242 354 aaPredicted RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 EIF2S3P41091 472 aaKnown RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 PPIAP62937 165 aaKnown RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 MRPS34P82930 218 aaKnown RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 GTF3C1Q12789 2109 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 DEFB109BQ30KR1 87 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 RPUSD3Q6P087 351 aaKnown RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 OR2W3Q7Z3T1 314 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 HSD17B13Q7Z5P4 300 aaPredicted RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 TMEM185AQ8NFB2 350 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 BORCS8Q96FH0 119 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 ESRP2Q9H6T0 727 aaKnown RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 SLC2A8Q9NY64 477 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 AK3Q9UIJ7 227 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 V9GYS6 101 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 TEX13DA0A0J9YY54 714 aaPredicted RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 MED19A0JLT2 244 aaPredicted RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 C5orf49A4QMS7 147 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 ABCD4O14678 606 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 SNAPINO95295 136 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 F12P00748 615 aaPredicted RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 CRHP06850 196 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 CD79AP11912 226 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 TMEM11P17152 192 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 CRYGSP22914 178 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 GSK3AP49840 483 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 LHX2P50458 406 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 ARF1P84077 181 aaKnown RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 SRSF3P84103 164 aaKnown RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 TMEM88Q6PEY1 159 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 FAM89BQ8N5H3 189 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 FDCSPQ8NFU4 85 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 OR5AP2Q8NGF4 316 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 KCNE4Q8WWG9 221 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 FER1L6-AS2Q96M78 137 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 OCSTAMPQ9BR26 566 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 NKX6-2Q9C056 277 aaPredicted RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 GPR35Q9HC97 309 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 ST3GAL6Q9Y274 331 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 A0A0U1RQV5 110 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 OR7C1O76099 320 aaPredicted RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 IL2RAP01589 272 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 SP1P08047 785 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 CTSSP25774 331 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 ASCL1P50553 236 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 FAM3AP98173 230 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 HOXA4Q00056 320 aaPredicted RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 ACOT7LQ6ZUV0 252 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 SLC25A26Q70HW3 274 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 KCNRGQ8N5I3 272 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 ZDHHC22Q8N966 263 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 PXT1Q8NFP0 134 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 OR1S2Q8NGQ3 325 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 OR11L1Q8NGX0 322 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 PAPOLGQ9BWT3 736 aaKnown RBP8.19□□□□□ -1.1
CUX1-206ENST00000437600 OR2H1Q9GZK4 316 aa8.19□□□□□ -1.1
CUX1-206ENST00000437600 FIGNL2A6NMB9 653 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 AGPAT2O15120 278 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 FBXO24O75426 580 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms