RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 LRRC75AQ8NAA5 344 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 SLC26A10Q8NG04 563 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 OR10A7Q8NGE5 316 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 EMG1Q92979 244 aaKnown RBP6.56□□□□□ -1.36
CPSF6-202ENST00000435070 SERINC2Q96SA4 455 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 SYT3Q9BQG1 590 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 GINS3Q9BRX5 216 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 SERTAD4Q9NUC0 356 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 FIGNL2A6NMB9 653 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 DBHP09172 617 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 CEACAM1P13688 526 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 BLVRBP30043 206 aaPredicted RBP6.56□□□□□ -1.36
CPSF6-202ENST00000435070 OPRM1P35372 400 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 FGF8P55075 233 aaPredicted RBP6.56□□□□□ -1.36
CPSF6-202ENST00000435070 UCP2P55851 309 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 UBE2NP61088 152 aaKnown RBP6.56□□□□□ -1.36
CPSF6-202ENST00000435070 TRIM61Q5EBN2 209 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 KCNIP4Q6PIL6 250 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 OR52N5Q8NH56 324 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 IL22RA2Q969J5 263 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 ADOQ96SZ5 270 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 ACTR3CQ9C0K3 210 aaPredicted RBP6.56□□□□□ -1.36
CPSF6-202ENST00000435070 ASCL3Q9NQ33 180 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 NXT1Q9UKK6 140 aaKnown RBP6.56□□□□□ -1.36
CPSF6-202ENST00000435070 FUT9Q9Y231 359 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 ESPL1Q14674 2120 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 PRRT4C9JH25 899 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 WISP1O95388 367 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 OR5AC1P0C628 307 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 CYBAP13498 195 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 FOLR1P15328 257 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 TBPP20226 339 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 CLN3Q13286 438 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 Q1RN00 199 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.56□□□□□ -1.365e-9■■■■■ 33.5
CPSF6-202ENST00000435070 MTURNQ8N3F0 131 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 GPR119Q8TDV5 335 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 BLNKQ8WV28 456 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 FAM173AQ9BQD7 235 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 PATZ1Q9HBE1 687 aaKnown RBP6.56□□□□□ -1.36
CPSF6-202ENST00000435070 CHST11Q9NPF2 352 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 A0A1W2PP55 124 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 TP53I11O14683 189 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 HLA-HP01893 362 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 CTGFP29279 349 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 PIGPP57054 158 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 TAF9Q16594 264 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 AGBL4Q5VU57 503 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 RNASE8Q8TDE3 154 aaKnown RBP6.56□□□□□ -1.36
CPSF6-202ENST00000435070 DNAJC4Q9NNZ3 241 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 HIF1ANQ9NWT6 349 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 FKBP11Q9NYL4 201 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 PLA2G3Q9NZ20 509 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 FAM230AA0A1W2PPH8 454 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 EML2O95834 649 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 MGAT2Q10469 447 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 IQCJQ1A5X6 159 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 VAX1Q5SQQ9 334 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 C11orf42Q8N5U0 333 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 TSLPQ969D9 159 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 CDH20Q9HBT6 801 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 CUTCQ9NTM9 273 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 OSGIN2Q9Y236 505 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 PAM16Q9Y3D7 125 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 R4GMQ9 66 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 AQP7O14520 342 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 HCRTR2O43614 444 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 SOD2P04179 222 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 BPIFB3P59826 476 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 RPS21P63220 83 aaKnown RBP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 C12orf76Q8N812 135 aaPredicted RBP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 NKAIN3Q8N8D7 197 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 OR51E1Q8TCB6 317 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 DAZLQ92904 295 aaKnown RBP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 TMEM18Q96B42 140 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 TBX15Q96SF7 602 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 GPX7Q96SL4 187 aaPredicted RBP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 SPEGQ15772 3267 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 A0A087WWC5 75 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 PRSS37A4D1T9 235 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 P04436 131 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 CEBPBP17676 345 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 GNB2P62879 340 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 PLCXD2Q0VAA5 305 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 TDRG1Q3Y452 100 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 DCAF10Q5QP82 559 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 TCEAL8Q8IYN2 117 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 CMTM1Q8IZ96 169 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 PGAM5Q96HS1 289 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 URM1Q9BTM9 101 aaKnown RBP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 DEFB126Q9BYW3 111 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 CHEK1O14757 476 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 TK1P04183 234 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 SERPINA7P05543 415 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 TNFSF10P50591 281 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 PTTG1IPP53801 180 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 RRADP55042 308 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 ARG2P78540 354 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 DPTQ07507 201 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 DNLZQ5SXM8 178 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms