RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 ROS1P08922 2347 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 IGHV3-64DA0A0J9YX35 117 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 SULT1C2O00338 296 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 MFNGO00587 321 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 CDIPTO14735 213 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 LANCL1O43813 399 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 RHBDL1O75783 438 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 PLAUP00749 431 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 IGHV1-46P01743 117 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 PGA5P0DJD9 388 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 TNFSF4P23510 183 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 GABRR1P24046 479 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 PRSS3P35030 304 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 SERPINF1P36955 418 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 EFNB3Q15768 340 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 TAF9Q16594 264 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 ZNF672Q499Z4 452 aaPredicted RBP9.53□□□□□ -0.88
LINC00539-203ENST00000434601 NHLRC3Q5JS37 347 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 PLAC9Q5JTB6 97 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 ZNF57Q68EA5 555 aaPredicted RBP9.53□□□□□ -0.88
LINC00539-203ENST00000434601 PRSS57Q6UWY2 283 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 DNM1P46Q6ZS02 220 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 Q8IYB0 196 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 CELF2-AS1Q8N7Q2 184 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 POC5Q8NA72 575 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 FCAMRQ8WWV6 532 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 NEUROG1Q92886 237 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 EMG1Q92979 244 aaKnown RBP9.53□□□□□ -0.88
LINC00539-203ENST00000434601 MEGF10Q96KG7 1140 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 ZNF488Q96MN9 340 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 OR2V2Q96R30 315 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 ZMAT3Q9HA38 289 aaKnown RBP9.53□□□□□ -0.88
LINC00539-203ENST00000434601 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC00539-203ENST00000434601 TBC1D24Q9ULP9 559 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 ST3GAL6Q9Y274 331 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 FN1P02751 2386 aaKnown RBP9.53□□□□□ -0.88
LINC00539-203ENST00000434601 CSPG4Q6UVK1 2322 aa9.53□□□□□ -0.88
LINC00539-203ENST00000434601 CADP27708 2225 aa9.52□□□□□ -0.88
LINC00539-203ENST00000434601 LINC00854A0A1B0GVQ3 168 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 MEIOCA2RUB1 952 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A10PA6NDY2 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A18PA6NE21 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A16PA6NEW6 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A20PA6NIJ5 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A8PA6NJQ4 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A7PA6NKC0 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A22PA8MWA6 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A12PA8MX19 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A5PA8MXJ8 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A23PA8MXZ1 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 F8VVB4 439 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 F8VWA3 439 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 M0R233 179 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 GEMIN2O14893 280 aaKnown RBP9.52□□□□□ -0.89
LINC00539-203ENST00000434601 LPLP06858 475 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 ADH4P08319 380 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 MELTFP08582 738 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 ACAA1P09110 424 aaPredicted RBP9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A15PP0C7V4 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A13PP0C7W8 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A14PP0C7W9 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM90A24PP0C7X0 464 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 GNB3P16520 340 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 PRKACAP17612 351 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 BLVRBP30043 206 aaPredicted RBP9.52□□□□□ -0.89
LINC00539-203ENST00000434601 APOBEC3AP31941 199 aaPredicted RBP9.52□□□□□ -0.89
LINC00539-203ENST00000434601 GDNFP39905 211 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 SRP9P49458 86 aaKnown RBP9.52□□□□□ -0.89
LINC00539-203ENST00000434601 TMEM50BP56557 158 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 TNFAIP6P98066 277 aaPredicted RBP9.52□□□□□ -0.89
LINC00539-203ENST00000434601 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 ASAH1Q13510 395 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 IL13RA2Q14627 380 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 ARL6IP1Q15041 203 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 PNLIPRP3Q17RR3 467 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 MPV17LQ2QL34 196 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 CDNFQ49AH0 187 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 NKAPLQ5M9Q1 402 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 Q5PR19 223 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 LINC00596Q86U02 117 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 RTN4RL2Q86UN3 420 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 C11orf53Q8IXP5 236 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 FAM58AQ8N1B3 248 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 POC1AQ8NBT0 407 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 GPX8Q8TED1 209 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 ARHGAP5-AS1Q96IT6 56 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 DIRC2Q96SL1 478 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 SMR3AQ99954 134 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 DHRS9Q9BPW9 319 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 NRIP2Q9BQI9 281 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 PECRQ9BY49 303 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 UFSP2Q9NUQ7 469 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 ZDHHC8Q9ULC8 765 aa9.52□□□□□ -0.89
LINC00539-203ENST00000434601 RBMX2Q9Y388 322 aaKnown RBP9.52□□□□□ -0.89
LINC00539-203ENST00000434601 A0A1W2PPR1 153 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 hCG_1807616A0A1W2PRN6 198 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 C17orf100A8MU93 164 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 B9A039 149 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 H7C417 338 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 NOS1APO75052 506 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms