RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 FBXO5Q9UKT4 447 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 SLC7A11Q9UPY5 501 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 UFC1Q9Y3C8 167 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OARD1Q9Y530 152 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OR51B4Q9Y5P0 310 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 TMEM131Q92545 1883 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 RIMS1Q86UR5 1692 aaKnown RBP1.94□□□□□ -2.1
CLK1-204ENST00000432425 NUP153P49790 1475 aaKnown RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 MRC2Q9UBG0 1479 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 SOGA1O94964 1423 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 NPATQ14207 1427 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 UHRF1BP1Q6BDS2 1440 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 IGLV4-69A0A075B6H9 119 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 IGHV2-70DA0A0C4DH43 119 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 TSPAN11A1L157 253 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 NKX2-6A6NCS4 301 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 CCDC182A6NF36 153 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 PP2D1A8MPX8 630 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 ZNF705EA8MWA4 302 aaPredicted RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 K7EMT4 169 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 GPR31O00270 319 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 KPNA4O00629 521 aaPredicted RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 PHYHO14832 338 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 PRKYO43930 277 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 POP7O75817 140 aaKnown RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 GPR75O95800 540 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 GABRG2P18507 467 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 TAC1P20366 129 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 OGNP20774 298 aaKnown RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 OMGP23515 440 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 F8A1P23610 371 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 S100GP29377 79 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 TALDO1P37837 337 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 VHLP40337 213 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 PTGDSP41222 190 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 AKR1C3P42330 323 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 GNG2P59768 71 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 GNG3P63215 75 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 SLC39A6Q13433 755 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 TRAM1Q15629 374 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 LRRC75BQ2VPJ9 315 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 TSPO2Q5TGU0 170 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 CST9Q5W186 159 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 EPGNQ6UW88 154 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 C12orf54Q6X4T0 127 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 ZFP2Q6ZN57 461 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 MBOAT2Q6ZWT7 520 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 SLC36A1Q7Z2H8 476 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 ARRDC1Q8N5I2 433 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 DUSP18Q8NEJ0 188 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 OR4F15Q8NGB8 312 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 OR6N1Q8NGY5 312 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 COQ8AQ8NI60 647 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 TNFAIP8L1Q8WVP5 186 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 C11orf40Q8WZ69 217 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 UCN3Q969E3 161 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 TCEAL3Q969E4 200 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 TMBIM1Q969X1 311 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 L3HYPDHQ96EM0 354 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 MS4A4EQ96PG1 132 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 GABRG3Q99928 467 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 FOXC2Q99958 501 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 KIFC1Q9BW19 673 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 TMEM59Q9BXS4 323 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 SRXN1Q9BYN0 137 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 CCDC90BQ9GZT6 254 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 ABCG5Q9H222 651 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 ARV1Q9H2C2 271 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 DSN1Q9H410 356 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 MAP1LC3AQ9H492 121 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 RGS18Q9NS28 235 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 HRASLS2Q9NWW9 162 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 CD84Q9UIB8 345 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 SLC35A3Q9Y2D2 325 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 DOCK3Q8IZD9 2030 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 PQLC2LA1A4F0 135 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 ISPDA4D126 451 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 LRCOL1A6NCL2 159 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 CCDC160A6NGH7 325 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 CLDN24A6NM45 220 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 ANKRD65E5RJM6 399 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 SSNA1O43805 119 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 LSM8O95777 96 aaKnown RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 MT-CO2P00403 227 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 HBE1P02100 147 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 RBP1P09455 135 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 TACSTD2P09758 323 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 ESDP10768 282 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 COX4I1P13073 169 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 ALOX5APP20292 161 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 RPL12P30050 165 aaKnown RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 SLC6A1P30531 599 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 IFNGR2P38484 337 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 RPL35P42766 123 aaKnown RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 GCLMP48507 274 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 HCCSP53701 268 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 RAB8AP61006 207 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms