RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 TPRA1Q86W33 373 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 Q8IYB0 196 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 FAM58AQ8N1B3 248 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 BATF2Q8N1L9 274 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 MUC20Q8N307 709 aaPredicted RBP5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 BOLLQ8N9W6 283 aaKnown RBP5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 MAPK1IP1LQ8NDC0 245 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DEFB108BQ8NET1 73 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 OR5T2Q8NGG2 359 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 OR51T1Q8NGJ9 327 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 TNFAIP8L1Q8WVP5 186 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 FOXRED1Q96CU9 486 aaPredicted RBP5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 CPNE2Q96FN4 548 aaPredicted RBP5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 TIMD4Q96H15 378 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 COX4I2Q96KJ9 171 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 RHOVQ96L33 236 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 KCTD7Q96MP8 289 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 GPER1Q99527 375 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 NAA50Q9GZZ1 169 aaKnown RBP5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DNTTIP1Q9H147 329 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 SLITRK2Q9H156 845 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 EXOSC4Q9NPD3 245 aaKnown RBP5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 RBFOX1Q9NWB1 397 aaKnown RBP5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 NLKQ9UBE8 527 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 IL36RNQ9UBH0 155 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 SCOCQ9UIL1 159 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 GSTK1Q9Y2Q3 226 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 RNF114Q9Y508 228 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 MAB21L2Q9Y586 359 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 V9GY05 133 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 MAST4O15021 2626 aa5.88□□□□□ -1.47
CHCHD3P1-201ENST00000425516 A0A1B0GW55 424 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 A0A1W2PP11 408 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 RFPL4AA6NLU0 287 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 RFPL4AL1F8VTS6 287 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 H7C1Q1 480 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 PDCD5O14737 125 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 LDLRAD4O15165 306 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 GABARAPO95166 117 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 CYB5AP00167 134 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 TFF1P04155 84 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 CLEC2LP0C7M8 214 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DUX4L2P0CJ85 424 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DUX4L3P0CJ86 424 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DUX4L4P0CJ87 422 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DUX4L5P0CJ88 424 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DUX4L6P0CJ89 424 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DUX4L7P0CJ90 424 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 CALCBP10092 127 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 VAMP1P23763 118 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 PRDX2P32119 198 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 RPS19P39019 145 aaKnown RBP5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 GMFBP60983 142 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 FGF12P61328 243 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 NCS1P62166 190 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 LSM3P62310 102 aaKnown RBP5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 KRTAP1-1Q07627 177 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 KCNJ8Q15842 424 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 SMIM21Q3B7S5 101 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 NHLRC3Q5JS37 347 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 GPR107Q5VW38 600 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 Q6P435 159 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DUX4L9Q6RFH8 374 aaPredicted RBP5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 GLIPR1L1Q6UWM5 242 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DCDC5Q6ZRR9 648 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 GPR141Q7Z602 305 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 SPICQ8N5J4 248 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 JAGN1Q8N5M9 183 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 CD177Q8N6Q3 437 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 PNLDC1Q8NA58 520 aaKnown RBP5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 OR6M1Q8NGM8 313 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 OR10K1Q8NGX5 313 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 TBC1D15Q8TC07 691 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DACT3Q96B18 629 aaPredicted RBP5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 SDSLQ96GA7 329 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 GAFA1Q96PS6 74 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 CCL13Q99616 98 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 GAL3ST1Q99999 423 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 METTL9Q9H1A3 318 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 NARFLQ9H6Q4 476 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 ZNF665Q9H7R5 613 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 SMURF1Q9HCE7 757 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 CTSZQ9UBR2 303 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DNAJB11Q9UBS4 358 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 GHRLQ9UBU3 117 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 DUX4Q9UBX2 424 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 FBLN5Q9UBX5 448 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 MIOXQ9UGB7 285 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 ING4Q9UNL4 249 aa5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 MRPS28Q9Y2Q9 187 aaKnown RBP5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 POLR3KQ9Y2Y1 108 aaPredicted RBP5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 YLPM1P49750 1951 aaKnown RBP5.87□□□□□ -1.47
CHCHD3P1-201ENST00000425516 FLNAP21333 2647 aaKnown RBP5.86□□□□□ -1.47
CHCHD3P1-201ENST00000425516 CR1P17927 2039 aa5.86□□□□□ -1.47
CHCHD3P1-201ENST00000425516 ISPDA4D126 451 aa5.86□□□□□ -1.47
CHCHD3P1-201ENST00000425516 IFITM5A6NNB3 132 aa5.86□□□□□ -1.47
CHCHD3P1-201ENST00000425516 NOTOA8MTQ0 251 aa5.86□□□□□ -1.47
CHCHD3P1-201ENST00000425516 TMEM14DPA8MWL7 114 aa5.86□□□□□ -1.47
CHCHD3P1-201ENST00000425516 A8MXK9 166 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms