RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 MICU1Q9BPX6 476 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 SLC25A21Q9BQT8 299 aaPredicted RBP17.85■□□□□ 0.45
GPC1-202ENST00000420138 FAAP24Q9BTP7 215 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 RTL8AQ9BWD3 113 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 MGAT4CQ9UBM8 478 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 A0A1B0GWJ7 208 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 RHBDL1O75783 438 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 AMY2AP04746 511 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 NLRC3Q7RTR2 1065 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 HOGA1Q86XE5 327 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 ZNF488Q96MN9 340 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 SULT4A1Q9BR01 284 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 IL36RNQ9UBH0 155 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 NOP16Q9Y3C1 178 aaKnown RBP17.84■□□□□ 0.45
GPC1-202ENST00000420138 COL6A6A6NMZ7 2263 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 UBE2QL1A1L167 161 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 CCL21O00585 134 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 HRH1P35367 487 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 SNRPD2P62316 118 aaKnown RBP17.84■□□□□ 0.45
GPC1-202ENST00000420138 MEF2DQ14814 521 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 USB1Q9BQ65 265 aaKnown RBP17.84■□□□□ 0.45
GPC1-202ENST00000420138 HDHD3Q9BSH5 251 aaPredicted RBP17.84■□□□□ 0.45
GPC1-202ENST00000420138 TMEM100Q9NV29 134 aa17.84■□□□□ 0.45
GPC1-202ENST00000420138 ZNF230Q9UIE0 474 aaPredicted RBP17.84■□□□□ 0.45
GPC1-202ENST00000420138 LRP5LA4QPB2 252 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 C3orf80F5H4A9 247 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 J3QT63 122 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 CRYAAP02489 173 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 THBDP07204 575 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 DNASE1P24855 282 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 CBX5P45973 191 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 ZNF154Q13106 437 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 MICBQ29980 383 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 RNASE10Q5GAN6 216 aaKnown RBP17.83■□□□□ 0.44
GPC1-202ENST00000420138 BRICD5Q6PL45 260 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 IDO2Q6ZQW0 420 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 BPIFB2Q8N4F0 458 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 OR11H4Q8NGC9 324 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 OR13C8Q8NGS7 320 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 GRPEL2Q8TAA5 225 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 MRGPRFQ96AM1 343 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 ALX4Q9H161 411 aaPredicted RBP17.83■□□□□ 0.44
GPC1-202ENST00000420138 SLC2A8Q9NY64 477 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 AK3Q9UIJ7 227 aa17.83■□□□□ 0.44
GPC1-202ENST00000420138 DISC1C4P0D8 188 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 TRAPPC2LH3BP13 241 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 PDCD6O75340 191 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 TBPP20226 339 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 OR8G1Q15617 311 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 SCCPDHQ8NBX0 429 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A10PA6NDY2 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A18PA6NE21 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A16PA6NEW6 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A20PA6NIJ5 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A8PA6NJQ4 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A7PA6NKC0 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A22PA8MWA6 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A12PA8MX19 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A5PA8MXJ8 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A23PA8MXZ1 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 TIMM8AO60220 97 aaPredicted RBP17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A15PP0C7V4 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A13PP0C7W8 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A14PP0C7W9 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 FAM90A24PP0C7X0 464 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 ZNF250P15622 560 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 CD40P25942 277 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 GCH1P30793 250 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 GLRXP35754 106 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 POLEQ07864 2286 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 NKPD1Q17RQ9 610 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 RGS7BPQ6MZT1 257 aaPredicted RBP17.82■□□□□ 0.44
GPC1-202ENST00000420138 LRP11Q86VZ4 500 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 OR52B4Q8NGK2 314 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 OR2T35Q8NGX2 323 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 OR4K15Q8NH41 348 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 CCDC107Q8WV48 283 aa17.82■□□□□ 0.44
GPC1-202ENST00000420138 IGKV1D-8A0A087WSZ0 117 aa17.81■□□□□ 0.44
GPC1-202ENST00000420138 ATP6V1G2-DDX39BF2Z307 99 aa17.81■□□□□ 0.44
GPC1-202ENST00000420138 ATXN7O15265 892 aaPredicted RBP17.81■□□□□ 0.44
GPC1-202ENST00000420138 PMP2P02689 132 aa17.81■□□□□ 0.44
GPC1-202ENST00000420138 CSN2P05814 226 aa17.81■□□□□ 0.44
GPC1-202ENST00000420138 GIPP09681 153 aaPredicted RBP17.81■□□□□ 0.44
GPC1-202ENST00000420138 MAFIPQ8WZ33 124 aa17.81■□□□□ 0.44
GPC1-202ENST00000420138 DYRK2Q92630 601 aa17.81■□□□□ 0.44
GPC1-202ENST00000420138 ST6GALNAC5Q9BVH7 336 aa17.81■□□□□ 0.44
GPC1-202ENST00000420138 CACNA1BQ00975 2339 aa17.81■□□□□ 0.44
GPC1-202ENST00000420138 PCNX1Q96RV3 2341 aa17.81■□□□□ 0.44
GPC1-202ENST00000420138 TMEM82A0PJX8 343 aa17.8■□□□□ 0.44
GPC1-202ENST00000420138 OR7C1O76099 320 aaPredicted RBP17.8■□□□□ 0.44
GPC1-202ENST00000420138 FUT3P21217 361 aa17.8■□□□□ 0.44
GPC1-202ENST00000420138 SNU13P55769 128 aaKnown RBP17.8■□□□□ 0.44
GPC1-202ENST00000420138 ERVK11-1P61568 191 aa17.8■□□□□ 0.44
GPC1-202ENST00000420138 VAX1Q5SQQ9 334 aa17.8■□□□□ 0.44
GPC1-202ENST00000420138 C11orf53Q8IXP5 236 aa17.8■□□□□ 0.44
GPC1-202ENST00000420138 TMEM171Q8WVE6 324 aa17.8■□□□□ 0.44
GPC1-202ENST00000420138 PRRT1Q99946 306 aa17.8■□□□□ 0.44
GPC1-202ENST00000420138 MSL2Q9HCI7 577 aa17.8■□□□□ 0.44
GPC1-202ENST00000420138 MYOZ1Q9NP98 299 aaPredicted RBP17.8■□□□□ 0.44
GPC1-202ENST00000420138 RCC2Q9P258 522 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms