RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 LMO7DNF2Z398 122 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 FCGR3BO75015 233 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 NEURL1O76050 574 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 BCL3P20749 454 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 NSUN5P2Q63ZY6 315 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 ACSM6Q6P461 480 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 GVQW1Q8N7I0 195 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 NUBPLQ8TB37 319 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 MCHR2Q969V1 340 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 STARD4Q96DR4 205 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 SP1P08047 785 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 SLC36A1Q7Z2H8 476 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 LIMS2Q7Z4I7 341 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 MAP1LC3CQ9BXW4 147 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 MTCH2Q9Y6C9 303 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 SPTY2D1-AS1A0A0U1RR47 76 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 GFERP55789 205 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 HLA-BQ31612 363 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 ANKRD55Q3KP44 614 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 LRRC10Q5BKY1 277 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 EIF4E3Q8N5X7 224 aaKnown RBP11.51□□□□□ -0.57
RNF43-201ENST00000407977 ICAM5Q9UMF0 924 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 MPC1Q9Y5U8 109 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 ZNF785A8K8V0 405 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 OPRK1P41145 380 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 RPL24P83731 157 aaKnown RBP11.51□□□□□ -0.57
RNF43-201ENST00000407977 MARVELD3Q96A59 401 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 MRGPRX3Q96LB0 322 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 LRRC3BQ96PB8 259 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 M0R1B8 84 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 IGFBP6P24592 240 aaPredicted RBP11.5□□□□□ -0.57
RNF43-201ENST00000407977 ZG16BQ96DA0 208 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 SEBOXQ9HB31 216 aaPredicted RBP11.5□□□□□ -0.57
RNF43-201ENST00000407977 LANCL1O43813 399 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 IGF2P01344 180 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 ACAA1P09110 424 aaPredicted RBP11.5□□□□□ -0.57
RNF43-201ENST00000407977 CTLA4P16410 223 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 FAM3BP58499 235 aaPredicted RBP11.5□□□□□ -0.57
RNF43-201ENST00000407977 COL5A1-AS1Q5SY13 56 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 OR6X1Q8NH79 312 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 ADIPOR1Q96A54 375 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 ATG101Q9BSB4 218 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 KCNK15Q9H427 330 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 A0A1B0GUL6 1792 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 IGHV3-64DA0A0J9YX35 117 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 OR2M5A3KFT3 312 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 NDUFB3O43676 98 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 PRKNO60260 465 aaPredicted RBP11.5□□□□□ -0.57
RNF43-201ENST00000407977 SLC35E3Q7Z769 313 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 KISS1RQ969F8 398 aaPredicted RBP11.5□□□□□ -0.57
RNF43-201ENST00000407977 R3HDMLQ9H3Y0 253 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 PPP1R3EQ9H7J1 279 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 AMDHD2Q9Y303 409 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 OR4C45A6NMZ5 311 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 HOXC4P09017 264 aaPredicted RBP11.5□□□□□ -0.57
RNF43-201ENST00000407977 PPP1CAP62136 330 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 LSM6P62312 80 aaKnown RBP11.5□□□□□ -0.57
RNF43-201ENST00000407977 PAFAH1B2P68402 229 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 ZIC1Q15915 447 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 TUSC1Q2TAM9 212 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 OR13G1Q8NGZ3 307 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 ATOH1Q92858 354 aaPredicted RBP11.5□□□□□ -0.57
RNF43-201ENST00000407977 SDK1Q7Z5N4 2213 aa11.5□□□□□ -0.57
RNF43-201ENST00000407977 TRDCB7Z8K6 153 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 ORM1P02763 201 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 FGF8P55075 233 aaPredicted RBP11.49□□□□□ -0.57
RNF43-201ENST00000407977 ZNF766Q5HY98 468 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 FRRS1LQ9P0K9 344 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 SPINK4O60575 86 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 LBX1P52954 281 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 MICBQ29980 383 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 TBC1D26Q86UD7 250 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 TMEM251Q8N6I4 163 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 VSTM2AQ8TAG5 236 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 A0A1B0GTH9 108 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 GAPDHP04406 335 aaKnown RBP11.49□□□□□ -0.57
RNF43-201ENST00000407977 ZNF273Q14593 569 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 COL19A1Q14993 1142 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 FAM109BQ6ICB4 259 aaPredicted RBP11.49□□□□□ -0.57
RNF43-201ENST00000407977 OR4S2Q8NH73 311 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 SLC52A3Q9NQ40 469 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 HSPB8Q9UJY1 196 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 PSG11Q9UQ72 335 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 EWSR1Q01844 656 aaKnown RBP eCLIP11.49□□□□□ -0.57
RNF43-201ENST00000407977 FNDC7Q5VTL7 733 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 NPEPL1Q8NDH3 523 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 BLNKQ8WV28 456 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 WDR13Q9H1Z4 485 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 MYOZ1Q9NP98 299 aaPredicted RBP11.49□□□□□ -0.57
RNF43-201ENST00000407977 FFAR1O14842 300 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 CHST1O43916 411 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 CXCL10P02778 98 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 NRIP2Q9BQI9 281 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 MYO9BQ13459 2157 aa11.49□□□□□ -0.57
RNF43-201ENST00000407977 A0A1B0GU03 582 aa11.48□□□□□ -0.57
RNF43-201ENST00000407977 A0A1W2PQD3 144 aa11.48□□□□□ -0.57
RNF43-201ENST00000407977 HOXA6P31267 233 aa11.48□□□□□ -0.57
RNF43-201ENST00000407977 UBE2L3P68036 154 aaKnown RBP11.48□□□□□ -0.57
RNF43-201ENST00000407977 ZNF683Q8IZ20 524 aa11.48□□□□□ -0.57
RNF43-201ENST00000407977 OR2D2Q9H210 308 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms