RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 DHRS3O75911 302 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 DNAJC8O75937 253 aaPredicted RBP9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 IFNGP01579 166 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CALCBP10092 127 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SLC2A5P22732 501 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CDK2P24941 298 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CD34P28906 385 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 DOC2BQ14184 412 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 GRK1Q15835 563 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 HLA-DRB5Q30154 266 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CLVS2Q5SYC1 327 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 C9orf66Q5T8R8 295 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ASPHD1Q5U4P2 390 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 KCTD18Q6PI47 426 aaPredicted RBP9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 Q6ZSR3 168 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 COMMD2Q86X83 199 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 TRMT10AQ8TBZ6 339 aaKnown RBP9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CAPSLQ8WWF8 208 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 RBMXL1Q96E39 390 aaKnown RBP9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CITED4Q96RK1 184 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CDRT15Q96T59 188 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 PKIBQ9C010 78 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SPAG4Q9NPE6 437 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 DNAJB9Q9UBS3 223 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ZMAT5Q9UDW3 170 aaKnown RBP9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 NUFIP1Q9UHK0 495 aaKnown RBP9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ZNF256Q9Y2P7 627 aaPredicted RBP9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ACOD1A6NK06 481 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 LEUTXA8MZ59 168 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 NDUFAB1O14561 156 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 GSC2O15499 205 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 KRT36O76013 467 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 HAND1O96004 215 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 HSD17B1P14061 328 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SLC6A1P30531 599 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 MAGEA2P43356 314 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 NPBWR2P48146 333 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ZNF91Q05481 1191 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 UBE2V2Q15819 145 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 HEPN1Q6WQI6 88 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 PLEKHG7Q6ZR37 379 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CPOQ8IVL8 374 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 STPG2Q8N412 459 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CHPT1Q8WUD6 406 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 MCUR1Q96AQ8 359 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CEP19Q96LK0 163 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 EDA2RQ9HAV5 297 aa9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 PAPOLBQ9NRJ5 636 aaKnown RBP9.3□□□□□ -0.92
SPTLC1P3-201ENST00000403408 A0A1W2PPI3 338 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CCDC182A6NF36 153 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SERPINE3A8MV23 424 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 M0QZK8 103 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 DLGAP1O14490 977 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 IGHG2P01859 326 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 FRMD6-AS1P0C7T7 363 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ATP6V1B2P21281 511 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 GABRR1P24046 479 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 GLIPR1P48060 266 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 P2RX3P56373 397 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ROM1Q03395 351 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 FHL3Q13643 280 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 HNF4GQ14541 408 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 KIR2DS1Q14954 304 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 MICAQ29983 383 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 C17orf58Q2M2W7 97 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ZNF260Q3ZCT1 412 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CD300LDQ6UXZ3 194 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ZBTB49Q6ZSB9 765 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 OR5M8Q8NGP6 311 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 OR56B4Q8NH76 319 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CORO2AQ92828 525 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 NSMCE2Q96MF7 247 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 RBFOX1Q9NWB1 397 aaKnown RBP9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 MAGEL2Q9UJ55 1249 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 UBE2J1Q9Y385 318 aaPredicted RBP9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SMAD5-AS1Q9Y6J3 95 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 KIAA1109Q2LD37 5005 aa9.29□□□□□ -0.92
SPTLC1P3-201ENST00000403408 FAM230AA0A1W2PPH8 454 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 H3BSH0 61 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 H3BUI4 141 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ENTPD6O75354 484 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SASH3O75995 380 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 HCKP08631 526 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 MRPL3P09001 348 aaKnown RBP9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 PEX2P28328 305 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ERP29P30040 261 aaKnown RBP9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 GINS1Q14691 196 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 LCN1P1Q5VSP4 162 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 FAM53AQ6NSI3 398 aaPredicted RBP9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 DEGS2Q6QHC5 323 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 C16orf89Q6UX73 402 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SLC25A26Q70HW3 274 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 TMEM179BQ7Z7N9 219 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 RTN4RL2Q86UN3 420 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 THNSL2Q86YJ6 484 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 DRAM1Q8N682 238 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 RNF152Q8N8N0 203 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ZNF596Q8TC21 504 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 LEAP2Q969E1 77 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 COQ2Q96H96 371 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms