RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 H7BYZ3 331 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 MGAT2Q10469 447 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 FOXF1Q12946 379 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 FAM90A2PQ658T7 463 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 TOMM20LQ6UXN7 152 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 LGI3Q8N145 548 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 DNASE2BQ8WZ79 361 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 TOMM40LQ969M1 308 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 TP53RKQ96S44 253 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 TPSD1Q9BZJ3 242 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 OR10A2Q9H208 303 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 TMEM74BQ9NUR3 256 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 PEBP1P30086 187 aaKnown RBP13.17□□□□□ -0.3
CYLD-202ENST00000398568 CLEC12BQ2HXU8 276 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 FBXO42Q6P3S6 717 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 GBGT1Q8N5D6 347 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 OR1N1Q8NGS0 311 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 SDSLQ96GA7 329 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 MPDZO75970 2070 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 B4E171 279 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 CDKN1BP46527 198 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 GALR1P47211 349 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 ZNF77Q15935 545 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 SLC25A24Q6NUK1 477 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 ERN2Q76MJ5 926 aaKnown RBP13.17□□□□□ -0.3
CYLD-202ENST00000398568 C16orf82Q7Z2V1 217 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 IL22RA1Q8N6P7 574 aa13.17□□□□□ -0.3
CYLD-202ENST00000398568 CTLA4P16410 223 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 WASP42768 502 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 FOXK1P85037 733 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 HSF1Q00613 529 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 ARL6IP1Q15041 203 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 LINC00346Q8IVM7 164 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 TMEM52Q8NDY8 209 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 OR52M1Q8NGK5 317 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 OR5L2Q8NGL0 311 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 OR2AJ1Q8NGZ0 328 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 PTPMT1Q8WUK0 201 aaPredicted RBP13.16□□□□□ -0.3
CYLD-202ENST00000398568 LYRM4Q9HD34 91 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 COA3Q9Y2R0 106 aaPredicted RBP13.16□□□□□ -0.3
CYLD-202ENST00000398568 PITX3O75364 302 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 RPL27P61353 136 aaKnown RBP13.16□□□□□ -0.3
CYLD-202ENST00000398568 PDGFRLQ15198 375 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 ACKR1Q16570 336 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 RIPPLY2Q5TAB7 128 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 RTL10Q7L3V2 364 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 CPEB2Q7Z5Q1 589 aaKnown RBP13.16□□□□□ -0.3
CYLD-202ENST00000398568 METTL27Q8N6F8 245 aaPredicted RBP13.16□□□□□ -0.3
CYLD-202ENST00000398568 BOD1Q96IK1 185 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 Q9N2K0 584 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 B3GALT1Q9Y5Z6 326 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 LOC101059948A0A1B0GTJ6 334 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 MPZL1O95297 269 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 TMEM11P17152 192 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 BLVRBP30043 206 aaPredicted RBP13.16□□□□□ -0.3
CYLD-202ENST00000398568 WNT5AP41221 380 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 SEC13P55735 322 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 SLC37A1P57057 533 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 DAZLQ92904 295 aaKnown RBP13.16□□□□□ -0.3
CYLD-202ENST00000398568 SPACA7Q96KW9 195 aa13.16□□□□□ -0.3
CYLD-202ENST00000398568 A0A1W2PP11 408 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 HPNP05981 417 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 UMODP07911 640 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 DBHP09172 617 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 GLI4P10075 376 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 CEACAM1P13688 526 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 GALNSP34059 522 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 ENDOGQ14249 297 aaKnown RBP13.15□□□□□ -0.3
CYLD-202ENST00000398568 TMEM183BQ1AE95 376 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 CST9LP1Q5W188 147 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 RTL6Q6ICC9 239 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 OGFOD3Q6PK18 319 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 PCGF1Q9BSM1 259 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 TBL1XR1Q9BZK7 514 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 NCOR1P1Q9H4R4 102 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 NAA60Q9H7X0 242 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 CALHM2Q9HA72 323 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 SCDO00767 359 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 TNFSF13O75888 250 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 BGLAPP02818 100 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 PFN1P07737 140 aaKnown RBP13.15□□□□□ -0.3
CYLD-202ENST00000398568 OR3A4PP47883 348 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 CNN1P51911 297 aaKnown RBP13.15□□□□□ -0.3
CYLD-202ENST00000398568 RTN4IP1Q8WWV3 396 aaPredicted RBP13.15□□□□□ -0.3
CYLD-202ENST00000398568 C20orf144Q9BQM9 153 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 ZPBPQ9BS86 351 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 PLEKHF2Q9H8W4 249 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 MSL2Q9HCI7 577 aa13.15□□□□□ -0.3
CYLD-202ENST00000398568 IGLV1-36A0A0B4J1U3 117 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 TRBV11-1A0A0K0K1C0 115 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 CD55P08174 381 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 EGR4Q05215 589 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 MPV17LQ2QL34 196 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 IL22RA2Q969J5 263 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 CTHRC1Q96CG8 243 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 CISD1Q9NZ45 108 aaKnown RBP13.14□□□□□ -0.31
CYLD-202ENST00000398568 SRSF10O75494 262 aaKnown RBP13.14□□□□□ -0.31
CYLD-202ENST00000398568 BCL2P10415 239 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 DEGS2Q6QHC5 323 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 SMIM15Q7Z3B0 74 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms