RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 OR2Z1Q8NG97 314 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 NEK7Q8TDX7 302 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 TMEM171Q8WVE6 324 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 GIMAP1Q8WWP7 306 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 SNAPC3Q92966 411 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 SLC6A7Q99884 636 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 PLK3Q9H4B4 646 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 NGBQ9NPG2 151 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 UFSP2Q9NUQ7 469 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 ATP23Q9Y6H3 246 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 FAM221AA4D161 298 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A10PA6NDY2 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A18PA6NE21 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A16PA6NEW6 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 DPRXA6NFQ7 191 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A20PA6NIJ5 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A8PA6NJQ4 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A7PA6NKC0 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 A8MV72 311 aaPredicted RBP7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A22PA8MWA6 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A12PA8MX19 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A5PA8MXJ8 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A23PA8MXZ1 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 PRSS44E7EML9 344 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 PYCARD-AS1I3L0S3 204 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 HSPB6O14558 160 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 NXPH2O95156 264 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 IGHV3-13P01766 116 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A15PP0C7V4 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A13PP0C7W8 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A14PP0C7W9 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A24PP0C7X0 464 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 ANXA7P20073 488 aaKnown RBP7.34□□□□□ -1.23
TDP1-203ENST00000393454 RAG2P55895 527 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 ADORA2A-AS1P86434 159 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 MZT1Q08AG7 82 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 MICBQ29980 383 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 CHRFAM7AQ494W8 412 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 ACTBL2Q562R1 376 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 PRAMEF6Q5VXH4 476 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 OR5H2Q8NGV7 314 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 PRR7Q8TB68 274 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 CA5BP1Q8WTZ4 195 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 GTF3AQ92664 365 aaKnown RBP7.34□□□□□ -1.23
TDP1-203ENST00000393454 POM121Q96HA1 1249 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 PRRT1Q99946 306 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 CHMP1AQ9HD42 196 aaPredicted RBP7.34□□□□□ -1.23
TDP1-203ENST00000393454 NPDC1Q9NQX5 325 aaPredicted RBP7.34□□□□□ -1.23
TDP1-203ENST00000393454 TAAR3PQ9P1P4 343 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 hCG_1807616A0A1W2PRN6 198 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 HS3ST1O14792 307 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 SSNA1O43805 119 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 ZNF735P0CB33 412 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 NAT1P18440 290 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 TBPP20226 339 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 TAS2R46P59540 309 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 TSPAN5P62079 268 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 MAB21L1Q13394 359 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 MPV17LQ2QL34 196 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 NHLRC3Q5JS37 347 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 ZNF826PQ6ZT77 177 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 Q8IYB0 196 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 CHAC2Q8WUX2 184 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 LRRC46Q96FV0 321 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 MRPL37Q9BZE1 423 aaKnown RBP7.34□□□□□ -1.23
TDP1-203ENST00000393454 MED28Q9H204 178 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 OR51J1Q9H342 316 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 NDRG3Q9UGV2 375 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 ERRFI1Q9UJM3 462 aaPredicted RBP7.34□□□□□ -1.23
TDP1-203ENST00000393454 ANAPC10Q9UM13 185 aa7.34□□□□□ -1.23
TDP1-203ENST00000393454 ICE1Q9Y2F5 2266 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 DIDO1Q9BTC0 2240 aaKnown RBP7.33□□□□□ -1.24
TDP1-203ENST00000393454 ZSCAN5BA6NJL1 495 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 MCRIP1C9JLW8 97 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 H3BUI4 141 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 DEGS1O15121 323 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 SPRY3O43610 288 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 PGA5P0DJD9 388 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 ZNF44P15621 663 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 ARPC4P59998 168 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 RRAS2P62070 204 aaPredicted RBP7.33□□□□□ -1.24
TDP1-203ENST00000393454 MPPED2Q15777 294 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 ST3GAL2Q16842 350 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 ADAM5Q6NVV9 412 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 FIP1L1Q6UN15 594 aaKnown RBP7.33□□□□□ -1.24
TDP1-203ENST00000393454 TMED4Q7Z7H5 227 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 LINC00596Q86U02 117 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 NUP37Q8NFH4 326 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 LILRB4Q8NHJ6 448 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 LINC01560Q8TB33 94 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 RNASE6Q93091 150 aaKnown RBP7.33□□□□□ -1.24
TDP1-203ENST00000393454 ELMOD3Q96FG2 381 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 SLC25A21Q9BQT8 299 aaPredicted RBP7.33□□□□□ -1.24
TDP1-203ENST00000393454 SEC22CQ9BRL7 303 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 ESRP2Q9H6T0 727 aaKnown RBP7.33□□□□□ -1.24
TDP1-203ENST00000393454 RHOFQ9HBH0 211 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 KCNJ16Q9NPI9 418 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 CA10Q9NS85 328 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 EHFQ9NZC4 300 aa7.33□□□□□ -1.24
TDP1-203ENST00000393454 SDCBPO00560 298 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms