RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 MAGT1Q9H0U3 335 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 CST9LQ9H4G1 147 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 CENPMQ9NSP4 180 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 ZNF581Q9P0T4 197 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 PRSS50Q9UI38 385 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 CES1P1Q9UKY3 287 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 LOC102723971A0A1B0GUV8 181 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 A0A1W2PP11 408 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 CPMP14384 443 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 GCH1P30793 250 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 CSNK1A1P48729 337 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 PDLIM4P50479 330 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 FXYD4P59646 89 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 NNATQ16517 81 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 ABCA11PQ4W5N1 156 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 VAX1Q5SQQ9 334 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 MYPOPQ86VE0 399 aaPredicted RBP13.18□□□□□ -0.3
VLDLR-202ENST00000382099 ARHGAP5-AS1Q96IT6 56 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 DEFB118Q96PH6 123 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 LPAR5Q9H1C0 372 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 Q9N2K0 584 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 MPDZO75970 2070 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 TICRRQ7Z2Z1 1910 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 A0A0U1RQK1 487 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 GPR89AB7ZAQ6 455 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 GPR89BP0CG08 455 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 TMEM241Q24JQ0 296 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 SPATA45Q537H7 98 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 ASTLQ6HA08 431 aaPredicted RBP13.18□□□□□ -0.3
VLDLR-202ENST00000382099 SLC18B1Q6NT16 456 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 MEX3BQ6ZN04 569 aaKnown RBP13.18□□□□□ -0.3
VLDLR-202ENST00000382099 ST6GALNAC3Q8NDV1 305 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 OR5C1Q8NGR4 320 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 OTOSQ8NHW6 89 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 FAM3CQ92520 227 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 ZNF845Q96IR2 970 aaPredicted RBP13.18□□□□□ -0.3
VLDLR-202ENST00000382099 OR51I2Q9H344 312 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 TUBD1Q9UJT1 453 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 COX11Q9Y6N1 276 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 FGF17O60258 216 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 VAMP5O95183 116 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 GOSR1O95249 250 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 BSXQ3C1V8 233 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 PHLDA2Q53GA4 152 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 GPER1Q99527 375 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 ATP5SQ99766 215 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 ZNF160Q9HCG1 818 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 MANBALQ9NQG1 85 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 GPR84Q9NQS5 396 aa13.18□□□□□ -0.3
VLDLR-202ENST00000382099 CTSBP07858 339 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 ZNF20P17024 532 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 ZNF787Q6DD87 383 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 PRR27Q6MZM9 219 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 Q6ZWC4 215 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 OR51G1Q8NGK1 321 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 HCFC2Q9Y5Z7 792 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 TSPAN2O60636 221 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 RAD51DO75771 328 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 PDGFBP01127 241 aaPredicted RBP13.17□□□□□ -0.3
VLDLR-202ENST00000382099 TPPP2P59282 170 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 NTHL1P78549 312 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 PRAMEF20Q5VT98 475 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 OGFOD3Q6PK18 319 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 GLIPR1L1Q6UWM5 242 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 CADM4Q8NFZ8 388 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 RHBDD3Q9Y3P4 386 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 RPS4Y1P22090 263 aaKnown RBP13.17□□□□□ -0.3
VLDLR-202ENST00000382099 DUSP3P51452 185 aaPredicted RBP13.17□□□□□ -0.3
VLDLR-202ENST00000382099 TESK1Q15569 626 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 KCTD18Q6PI47 426 aaPredicted RBP13.17□□□□□ -0.3
VLDLR-202ENST00000382099 OR2C3Q8N628 320 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 KREMEN2Q8NCW0 462 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 OVCA2Q8WZ82 227 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 BET1LQ9NYM9 111 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 WIPI2Q9Y4P8 454 aa13.17□□□□□ -0.3
VLDLR-202ENST00000382099 ETV2O00321 342 aaPredicted RBP13.16□□□□□ -0.3
VLDLR-202ENST00000382099 CCL16O15467 120 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 METAP1P53582 386 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 PIGPP57054 158 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 ZFP36L1Q07352 338 aaKnown RBP13.16□□□□□ -0.3
VLDLR-202ENST00000382099 PLAC9Q5JTB6 97 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 TPTE2P1Q5T6R2 138 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 SAXO1Q8IYX7 474 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 ABHD3Q8WU67 409 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 PSG1P11464 419 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 HIST1H1DP16402 221 aaKnown RBP13.16□□□□□ -0.3
VLDLR-202ENST00000382099 CFPP27918 469 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 ZNF117Q03924 483 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 ACTL10Q5JWF8 245 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 SLC8B1Q6J4K2 584 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 LINC01551Q86U37 167 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 TGIF2LYQ8IUE0 185 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 TMEFF1Q8IYR6 380 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 FBXL14Q8N1E6 418 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 D2HGDHQ8N465 521 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 AGBL5Q8NDL9 886 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 TNFRSF14Q92956 283 aa13.16□□□□□ -0.3
VLDLR-202ENST00000382099 KTI12Q96EK9 354 aaPredicted RBP13.16□□□□□ -0.3
VLDLR-202ENST00000382099 ELL3Q9HB65 397 aaPredicted RBP13.16□□□□□ -0.3
VLDLR-202ENST00000382099 KLHL13Q9P2N7 655 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms