RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SRD5A2P31213 254 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 HOXD3P31249 432 aaPredicted RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 S100A11P31949 105 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 OTX1P32242 354 aaPredicted RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 CDAP32320 146 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 CBX5P45973 191 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 PRKXP51817 358 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 AP2S1P53680 142 aaPredicted RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 CLDN17P56750 224 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 H2BFSP57053 126 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 TAS2R31P59538 309 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 GMFBP60983 142 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 UBE2MP61081 183 aaKnown RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 RAB14P61106 215 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 ENDOGQ14249 297 aaKnown RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 GK2Q14410 553 aaPredicted RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 C2orf68Q2NKX9 166 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 ZNF528Q3MIS6 628 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 ACTBL2Q562R1 376 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 RNASE10Q5GAN6 216 aaKnown RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 NHLRC3Q5JS37 347 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 C9orf152Q5JTZ5 239 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 LY6G6FQ5SQ64 297 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 VAX1Q5SQQ9 334 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 CLVS2Q5SYC1 327 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 RAET1LQ5VY80 246 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 CARD17Q5XLA6 110 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 FAHD2BQ6P2I3 314 aaPredicted RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 C3P1Q6ZMU1 363 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 ABHD12BQ7Z5M8 362 aaPredicted RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 TRAPPC6BQ86SZ2 158 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 NAA40Q86UY6 237 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 SLC25A42Q86VD7 318 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 RPS19BP1Q86WX3 136 aaKnown RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 NAXDQ8IW45 347 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 MAML2Q8IZL2 1156 aaPredicted RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 BEST3Q8N1M1 668 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 C12orf45Q8N5I9 185 aaPredicted RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 PRR26Q8N8Z3 221 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 ACBD4Q8NC06 268 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 CLEC18CQ8NCF0 446 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 GJC3Q8NFK1 279 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 OR9K2Q8NGE7 335 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 OR10R2Q8NGX6 335 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 OR8S1Q8NH09 359 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 KCNG3Q8TAE7 436 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 NUDCD2Q8WVJ2 157 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 KCNE4Q8WWG9 221 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 NABP1Q96AH0 204 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 FAHD2AQ96GK7 314 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 SFXN2Q96NB2 322 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 GUCD1Q96NT3 240 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 NKX3-1Q99801 234 aaPredicted RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 PIGQQ9BRB3 760 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 ZNF416Q9BWM5 594 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 B3GNT4Q9C0J1 378 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 LPAR5Q9H1C0 372 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 HPF1Q9NWY4 346 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 GHRLQ9UBU3 117 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 KCNN3Q9UGI6 736 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 DKKL1Q9UK85 242 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 FBXO4Q9UKT5 387 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 MRPS28Q9Y2Q9 187 aaKnown RBP4.12□□□□□ -1.75
USP48-202ENST00000374730 V9GYS6 101 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 TECTAO75443 2155 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 WDFY3Q8IZQ1 3526 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 DMDP11532 3685 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 TRAV14DV4A0A0A6YYC5 116 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 A0A0A6YYD4 124 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 IGKV1-9A0A0C4DH69 117 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 A0A0J9YW62 118 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 FOXI3A8MTJ6 420 aaPredicted RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 INAFM1C9JVW0 142 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 NPIPA2E9PIF3 369 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 NPIPA3F8WFD2 350 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 MFNGO00587 321 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 SMAD9O15198 467 aaKnown RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 RER1O15258 196 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ARPC5O15511 151 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 SSX5O60225 188 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ZIC3O60481 467 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 DHRS3O75911 302 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 STK17BO94768 372 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 HPP00738 406 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 CFDP00746 253 aaPredicted RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 PDGFBP01127 241 aaPredicted RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 OPN1LWP04000 364 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 LCATP04180 440 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 HCKP08631 526 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 SLC2A1P11166 492 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 SLC25A4P12235 298 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ICAM2P13598 275 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 HIST1H1DP16402 221 aaKnown RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 ABOP16442 354 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 KLK2P20151 261 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ZBTB25P24278 435 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 MT3P25713 68 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 CD34P28906 385 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 AGTR1P30556 359 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 GUCA1AP43080 201 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms