RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 OLFML2AQ68BL7 652 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 WDR82Q6UXN9 313 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 ST8SIA4Q92187 359 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 DHRS9Q9BPW9 319 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 NRIP2Q9BQI9 281 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 ZDHHC8Q9ULC8 765 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 HSF4Q9ULV5 492 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 POLDIP2Q9Y2S7 368 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A10PA6NDY2 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A18PA6NE21 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A16PA6NEW6 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A20PA6NIJ5 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A8PA6NJQ4 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A7PA6NKC0 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 A6NLC8 198 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A22PA8MWA6 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A12PA8MX19 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A5PA8MXJ8 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A23PA8MXZ1 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A15PP0C7V4 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A13PP0C7W8 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A14PP0C7W9 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM90A24PP0C7X0 464 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 HOXA4Q00056 320 aaPredicted RBP15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 PLET1Q6UQ28 207 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 ZCCHC24Q8N2G6 241 aaKnown RBP15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 CELF2-AS1Q8N7Q2 184 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 ITLN1Q8WWA0 313 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 PECRQ9BY49 303 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 COPZ2Q9P299 210 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 NLKQ9UBE8 527 aa15.34■□□□□ 0.05
SMARCD3-202ENST00000356800 LRBAP50851 2863 aa15.33■□□□□ 0.05
SMARCD3-202ENST00000356800 A0A1W2PPR1 153 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 C17orf100A8MU93 164 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 M0R233 179 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 ADH4P08319 380 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 ACAA1P09110 424 aaPredicted RBP15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 RCVRNP35243 200 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 PMELP40967 661 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 SNU13P55769 128 aaKnown RBP15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 GNG2P59768 71 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 PDCD1Q15116 288 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 TRAPPC6BQ86SZ2 158 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 FAM58AQ8N1B3 248 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 TMEM229BQ8NBD8 167 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 POC1AQ8NBT0 407 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 MMP28Q9H239 520 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 C1orf123Q9NWV4 160 aa15.33■□□□□ 0.04
SMARCD3-202ENST00000356800 SSX5O60225 188 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 NOS1APO75052 506 aaPredicted RBP15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 MT-ND4P03905 459 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 PRKACAP17612 351 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 FAUP35544 74 aaKnown RBP15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 TAS2R19P59542 299 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 TNFAIP6P98066 277 aaPredicted RBP15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 SWI5Q1ZZU3 235 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 MEX3BQ6ZN04 569 aaKnown RBP15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 NUDCD2Q8WVJ2 157 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 MARVELD1Q9BSK0 173 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 DPAGT1Q9H3H5 408 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 PLEKHJ1Q9NW61 149 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 IL19Q9UHD0 177 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 ANAPC10Q9UM13 185 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 DYSFO75923 2080 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 COL12A1Q99715 3063 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 FUOMA2VDF0 154 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 MEIS3P1A6NDR6 274 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 B9A039 149 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 WNT9BO14905 357 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 CD55P08174 381 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 CHATP28329 748 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 DUSP1P28562 367 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 GATA4P43694 442 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 CBX5P45973 191 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 BCAP31P51572 246 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 C6orf201Q7Z4U5 140 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 MOGAT3Q86VF5 341 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 Q8IYB0 196 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 EMG1Q92979 244 aaKnown RBP15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 OCSTAMPQ9BR26 566 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 HES4Q9HCC6 221 aa15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 KLF2Q9Y5W3 355 aaPredicted RBP15.32■□□□□ 0.04
SMARCD3-202ENST00000356800 TPD52L2O43399 206 aaKnown RBP15.31■□□□□ 0.04
SMARCD3-202ENST00000356800 AKAIN1P0CW23 69 aa15.31■□□□□ 0.04
SMARCD3-202ENST00000356800 GIFP27352 417 aa15.31■□□□□ 0.04
SMARCD3-202ENST00000356800 GMFBP60983 142 aa15.31■□□□□ 0.04
SMARCD3-202ENST00000356800 LINC00596Q86U02 117 aa15.31■□□□□ 0.04
SMARCD3-202ENST00000356800 MUC15Q8N387 334 aa15.31■□□□□ 0.04
SMARCD3-202ENST00000356800 CREB3L1Q96BA8 519 aa15.31■□□□□ 0.04
SMARCD3-202ENST00000356800 UPRTQ96BW1 309 aa15.31■□□□□ 0.04
SMARCD3-202ENST00000356800 DIRC2Q96SL1 478 aa15.31■□□□□ 0.04
SMARCD3-202ENST00000356800 CACNG6Q9BXT2 260 aa15.31■□□□□ 0.04
SMARCD3-202ENST00000356800 WDR13Q9H1Z4 485 aa15.31■□□□□ 0.04
SMARCD3-202ENST00000356800 hCG_1807616A0A1W2PRN6 198 aa15.3■□□□□ 0.04
SMARCD3-202ENST00000356800 H3BUI4 141 aa15.3■□□□□ 0.04
SMARCD3-202ENST00000356800 PDCD6O75340 191 aa15.3■□□□□ 0.04
SMARCD3-202ENST00000356800 NXPH2O95156 264 aa15.3■□□□□ 0.04
SMARCD3-202ENST00000356800 CD74P04233 296 aa15.3■□□□□ 0.04
SMARCD3-202ENST00000356800 CD3DP04234 171 aa15.3■□□□□ 0.04
SMARCD3-202ENST00000356800 NAT1P18440 290 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms