RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ST8SIA3O43173 380 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 NRASP01111 189 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 MT-ND4LP03901 98 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 FGF5P12034 268 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 SSR4P51571 173 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 EXT1Q16394 746 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 ZNF100Q8IYN0 542 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 SPACA1Q9HBV2 294 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 ATPIF1Q9UII2 106 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 NSG1A0A0A6YYJ2 146 aa21.24■□□□□ 0.99
CPNE1-202ENST00000352393 C5orf52A6NGY3 159 aa21.24■□□□□ 0.99
CPNE1-202ENST00000352393 GDF9O60383 454 aa21.24■□□□□ 0.99
CPNE1-202ENST00000352393 OR4D5Q8NGN0 318 aa21.24■□□□□ 0.99
CPNE1-202ENST00000352393 TAAR9Q96RI9 348 aa21.24■□□□□ 0.99
CPNE1-202ENST00000352393 RSRP1Q9BUV0 290 aa21.24■□□□□ 0.99
CPNE1-202ENST00000352393 FBXO9Q9UK97 447 aaPredicted RBP21.24■□□□□ 0.99
CPNE1-202ENST00000352393 RCL1Q9Y2P8 373 aaKnown RBP21.24■□□□□ 0.99
CPNE1-202ENST00000352393 DNPH1O43598 174 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 C1QL1O75973 258 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 SNRNP70P08621 437 aaKnown RBP21.23■□□□□ 0.99
CPNE1-202ENST00000352393 ZNF44P15621 663 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 AGAP20933 346 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 SYT3Q9BQG1 590 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 CRLF2Q9HC73 371 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 hCG_38984A0A1B0GV85 526 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 K7ESF4 209 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 PDCD6O75340 191 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 GLI4P10075 376 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 ZNF32P17041 273 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 NTF4P34130 210 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 OR8B8Q15620 311 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 CCDC71LQ8N9Z2 235 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 AKR7LQ8NHP1 331 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 IP6K3Q96PC2 410 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 ZNF391Q9UJN7 358 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 ST3GAL6Q9Y274 331 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 TMED3Q9Y3Q3 217 aa21.23■□□□□ 0.99
CPNE1-202ENST00000352393 PRSS44E7EML9 344 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 UBE2CO00762 179 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 PHF1O43189 567 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-202ENST00000352393 NHLH2Q02577 135 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 M1APQ8TC57 530 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 SAP25Q8TEE9 199 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 EIF5A2Q9GZV4 153 aaKnown RBP21.22■□□□□ 0.99
CPNE1-202ENST00000352393 C11orf1Q9H5F2 150 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 GJE1A6NN92 205 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 GLAP06280 429 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 AADACP22760 399 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 PMELP40967 661 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 GLP1RP43220 463 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 HTR5AP47898 357 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 B3GALT5-AS1P59052 145 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 SLC35G3Q8N808 338 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 CPT1CQ8TCG5 803 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 SLC39A7Q92504 469 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 HS3ST3B1Q9Y662 390 aa21.22■□□□□ 0.99
CPNE1-202ENST00000352393 SHANK1Q9Y566 2161 aa21.21■□□□□ 0.99
CPNE1-202ENST00000352393 PI4KAP42356 2102 aa21.21■□□□□ 0.99
CPNE1-202ENST00000352393 B4GALT1P15291 398 aa21.21■□□□□ 0.99
CPNE1-202ENST00000352393 RAC3P60763 192 aa21.21■□□□□ 0.99
CPNE1-202ENST00000352393 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.21■□□□□ 0.99
CPNE1-202ENST00000352393 HSD17B11Q8NBQ5 300 aa21.21■□□□□ 0.99
CPNE1-202ENST00000352393 NAXEQ8NCW5 288 aa21.21■□□□□ 0.99
CPNE1-202ENST00000352393 BOD1Q96IK1 185 aa21.21■□□□□ 0.99
CPNE1-202ENST00000352393 TP53RKQ96S44 253 aa21.21■□□□□ 0.99
CPNE1-202ENST00000352393 UBE2ZQ9H832 354 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-202ENST00000352393 PTRH2Q9Y3E5 179 aaKnown RBP21.21■□□□□ 0.99
CPNE1-202ENST00000352393 A0A1W2PPH5 198 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 A6NLC8 198 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 K7N7A8 449 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 CBR3O75828 277 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 PRH1P02810 166 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 FUT6P51993 359 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 RBM11P57052 281 aaKnown RBP21.2■□□□□ 0.98
CPNE1-202ENST00000352393 DAZAP2Q15038 168 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-202ENST00000352393 ZNF561Q8N587 486 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 ALKBH3Q96Q83 286 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-202ENST00000352393 A0A1B0GW64 132 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 ZNF716A6NP11 495 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 UMAD1C9J7I0 102 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 M0R036 132 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 PATE4P0C8F1 98 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 SMIM6P0DI80 62 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 TCN2P20062 427 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 HERV-K104P61576 105 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 EWSR1Q01844 656 aaKnown RBP eCLIP21.2■□□□□ 0.98
CPNE1-202ENST00000352393 MALLQ13021 153 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 EIF2S3LQ2VIR3 472 aaKnown RBP21.2■□□□□ 0.98
CPNE1-202ENST00000352393 TMEM211Q6ICI0 200 aa21.2■□□□□ 0.98
CPNE1-202ENST00000352393 CCDC85CA6NKD9 419 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 KLF7O75840 302 aaPredicted RBP21.19■□□□□ 0.98
CPNE1-202ENST00000352393 PSG4Q00888 419 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 RHEBQ15382 184 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 TGIF1Q15583 401 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 ISOC2Q96AB3 205 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 PBDC1Q9BVG4 233 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 WNT5BQ9H1J7 359 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 PPYP01298 95 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 S100A8P05109 93 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 ZNF92Q03936 586 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms