RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 TO15178 435 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 ADAM11O75078 769 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 SFTPCP11686 197 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 FABP4P15090 132 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 C3AR1Q16581 482 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 CLPPQ16740 277 aaPredicted RBP13.48□□□□□ -0.25
COL11A2-201ENST00000341947 TUSC5Q8IXB3 177 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 CTGFP29279 349 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 LSM11P83369 360 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL11A2-201ENST00000341947 PPP1R1AQ13522 171 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 GGNBP1Q5YKI7 109 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 LIAT1Q6ZQX7 453 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 SH2D5Q6ZV89 423 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 PDPNQ86YL7 162 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 HEXA-AS1Q9H8Q6 139 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 PARD6AQ9NPB6 346 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 UFC1Q9Y3C8 167 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 DDX60LQ5H9U9 1706 aaKnown RBP13.48□□□□□ -0.25
COL11A2-201ENST00000341947 MOGAT3Q86VF5 341 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 OR10G4Q8NGN3 311 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 OR10G9Q8NGN4 311 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 OR10G7Q8NGN6 311 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 COX14Q96I36 57 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 HAND1O96004 215 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 CT62P0C5K7 136 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 OR5AC1P0C628 307 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 ACP1P24666 158 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 RBM14Q96PK6 669 aaKnown RBP13.48□□□□□ -0.25
COL11A2-201ENST00000341947 RASL10BQ96S79 203 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 RNF7Q9UBF6 113 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 A0A1W2PQD3 144 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 FAM24AA6NFZ4 105 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 RPL30P62888 115 aaKnown RBP13.48□□□□□ -0.25
COL11A2-201ENST00000341947 SIGLEC14Q08ET2 396 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 TMEM88Q6PEY1 159 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 R3HDM4Q96D70 268 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 MTFP1Q9UDX5 166 aa13.48□□□□□ -0.25
COL11A2-201ENST00000341947 FGF9P31371 208 aaPredicted RBP13.47□□□□□ -0.25
COL11A2-201ENST00000341947 DRD3P35462 400 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 YBX1P67809 324 aaKnown RBP13.47□□□□□ -0.25
COL11A2-201ENST00000341947 RNF165Q6ZSG1 346 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 PRSS42Q7Z5A4 293 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 VN1R4Q7Z5H5 301 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 CCDC190Q86UF4 302 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 OR8B12Q8NGG6 310 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 TREM2Q9NZC2 230 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 ASPDHA6ND91 283 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 GNG7O60262 68 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 SPINK4O60575 86 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 SEMA7AO75326 666 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 AGFG2O95081 481 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 MPZL1O95297 269 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 WNT1P04628 370 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 CTLA4P16410 223 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 ZIC1Q15915 447 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 OR2M3Q8NG83 312 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 TRDCB7Z8K6 153 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 CDK2AP1O14519 115 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 CST2P09228 141 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 AREGP15514 252 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 GZMKP49863 264 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 MAP6Q96JE9 813 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 LAMB1P07942 1786 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 HOXB3P14651 431 aaPredicted RBP13.47□□□□□ -0.25
COL11A2-201ENST00000341947 SLC6A1P30531 599 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 FAM109BQ6ICB4 259 aaPredicted RBP13.47□□□□□ -0.25
COL11A2-201ENST00000341947 DOLPP1Q86YN1 238 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 ZNF665Q9H7R5 613 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 WSB1Q9Y6I7 421 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 PTHLHP12272 177 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 UBE2L3P68036 154 aaKnown RBP13.47□□□□□ -0.25
COL11A2-201ENST00000341947 HIST1H3AP68431 136 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 CLEC9AQ6UXN8 241 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 DYNLRB2Q8TF09 96 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 TRAPPC4Q9Y296 219 aa13.47□□□□□ -0.25
COL11A2-201ENST00000341947 SIRT5Q9NXA8 310 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 KIAA1324LA8MWY0 1029 aaPredicted RBP13.46□□□□□ -0.25
COL11A2-201ENST00000341947 SPNP16150 400 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 RNF212Q495C1 297 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 ZNF66Q6ZN08 573 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 TMEFF2Q9UIK5 374 aaPredicted RBP13.46□□□□□ -0.25
COL11A2-201ENST00000341947 RAB32Q13637 225 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 HMGCLL1Q8TB92 370 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 NTMQ9P121 344 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 STARD10Q9Y365 291 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 DHRS2Q13268 280 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 OR2C3Q8N628 320 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 ABHD14AQ9BUJ0 271 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 FAM60AQ9NP50 221 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 SLC7A10Q9NS82 523 aa13.46□□□□□ -0.25
COL11A2-201ENST00000341947 A0A1B0GTH9 108 aa13.46□□□□□ -0.26
COL11A2-201ENST00000341947 EML2O95834 649 aa13.46□□□□□ -0.26
COL11A2-201ENST00000341947 BCL3P20749 454 aa13.46□□□□□ -0.26
COL11A2-201ENST00000341947 TIAL1Q01085 375 aaKnown RBP eCLIP13.46□□□□□ -0.26
COL11A2-201ENST00000341947 CBLN3Q6UW01 205 aa13.46□□□□□ -0.26
COL11A2-201ENST00000341947 OR4A4PQ8NGN8 299 aa13.46□□□□□ -0.26
COL11A2-201ENST00000341947 MOGAT1Q96PD6 335 aa13.46□□□□□ -0.26
COL11A2-201ENST00000341947 TMEM167BQ9NRX6 74 aa13.46□□□□□ -0.26
COL11A2-201ENST00000341947 GPR27Q9NS67 375 aa13.46□□□□□ -0.26
COL11A2-201ENST00000341947 ID4P47928 161 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms