RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 SSUH2Q9Y2M2 353 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 SLC22A20A6NK97 555 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 ZNF724A8MTY0 619 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 GEMIN2O14893 280 aaKnown RBP12.95□□□□□ -0.34
TPM3-208ENST00000341485 FARS2O95363 451 aaKnown RBP12.95□□□□□ -0.34
TPM3-208ENST00000341485 IFNA2P01563 188 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 CTSDP07339 412 aaPredicted RBP12.95□□□□□ -0.34
TPM3-208ENST00000341485 FCGR3AP08637 254 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 HOXB5P09067 269 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 DTYMKP23919 212 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 OPRM1P35372 400 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 ECI1P42126 302 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 FUT6P51993 359 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 PDZK1IP1Q13113 114 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 RAB32Q13637 225 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 PLCXD3Q63HM9 321 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 PIGCQ92535 297 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 C1QTNF5Q9BXJ0 243 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 RNF122Q9H9V4 155 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 BCO1Q9HAY6 547 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 SLC7A10Q9NS82 523 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 DECR2Q9NUI1 292 aa12.95□□□□□ -0.34
TPM3-208ENST00000341485 ZNF407Q9C0G0 2248 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 ZNF816-ZNF321PA0A0X1KG74 233 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 AQP7O14520 342 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 XRCC2O43543 280 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 SFTPBP07988 381 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 OR5H8P0DN80 308 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 ARF1P84077 181 aaKnown RBP12.94□□□□□ -0.34
TPM3-208ENST00000341485 BRICD5Q6PL45 260 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 Q6ZS92 163 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 FBXL14Q8N1E6 418 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 OSR2Q8N2R0 312 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 OR10AD1Q8NGE0 317 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 OR51F2Q8NH61 342 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 SPSB4Q96A44 273 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 IL36GQ9NZH8 169 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 SLC7A11Q9UPY5 501 aa12.94□□□□□ -0.34
TPM3-208ENST00000341485 RBM39Q14498 530 aaKnown RBP12.93□□□□□ -0.34
TPM3-208ENST00000341485 NRN1LQ496H8 165 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 SARAFQ96BY9 339 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 LINC00470Q9BZP3 86 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 PRDM14Q9GZV8 571 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 TAS2R3Q9NYW6 316 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 FREM1Q5H8C1 2179 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 DNAJC13O75165 2243 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 CRYM-AS1A6NIL9 109 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 ZNHIT1O43257 154 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 TPT1P13693 172 aaKnown RBP12.93□□□□□ -0.34
TPM3-208ENST00000341485 RBMXP38159 391 aaKnown RBP12.93□□□□□ -0.34
TPM3-208ENST00000341485 NAAAQ02083 359 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 PLEKHN1Q494U1 663 aaPredicted RBP12.93□□□□□ -0.34
TPM3-208ENST00000341485 C9orf135Q5VTT2 229 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 SLC30A7Q8NEW0 376 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 APH1AQ96BI3 265 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 MARS2Q96GW9 593 aaKnown RBP12.93□□□□□ -0.34
TPM3-208ENST00000341485 AQP10Q96PS8 301 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 TAAR6Q96RI8 345 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 NECAP2Q9NVZ3 263 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 C1orf123Q9NWV4 160 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 GSKIPQ9P0R6 139 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 ZNF175Q9Y473 711 aa12.93□□□□□ -0.34
TPM3-208ENST00000341485 FAM221AA4D161 298 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 K7EM74 188 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 K7ENP7 123 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 FGF16O43320 207 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 ZNF205O95201 554 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 FOXG1P55316 489 aaPredicted RBP12.92□□□□□ -0.34
TPM3-208ENST00000341485 BTN1A1Q13410 526 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 PDCD1Q15116 288 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 INO80CQ6PI98 192 aaPredicted RBP12.92□□□□□ -0.34
TPM3-208ENST00000341485 COLCA1Q6ZS62 124 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 SGPP2Q8IWX5 399 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 BAP18Q8IXM2 172 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 RBMXL3Q8N7X1 1067 aaKnown RBP12.92□□□□□ -0.34
TPM3-208ENST00000341485 OR1S2Q8NGQ3 325 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 ST3GAL6Q9Y274 331 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 A0A096LPE4 126 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 A0A1W2PPZ6 126 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 ZNF850A8MQ14 1090 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 SIGLEC5O15389 551 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 S100A10P60903 97 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 DHRS11Q6UWP2 260 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 CALHM1Q8IU99 346 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 TRIB1Q96RU8 372 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 DKK4Q9UBT3 224 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 ATPIF1Q9UII2 106 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 PCDHB10Q9UN67 800 aa12.92□□□□□ -0.34
TPM3-208ENST00000341485 PDCD6O75340 191 aa12.91□□□□□ -0.34
TPM3-208ENST00000341485 WISP2O76076 250 aa12.91□□□□□ -0.34
TPM3-208ENST00000341485 DAZAP2Q15038 168 aaPredicted RBP12.91□□□□□ -0.34
TPM3-208ENST00000341485 PXDC1Q5TGL8 231 aa12.91□□□□□ -0.34
TPM3-208ENST00000341485 TFAP2EQ6VUC0 442 aa12.91□□□□□ -0.34
TPM3-208ENST00000341485 Q6ZPA2 131 aa12.91□□□□□ -0.34
TPM3-208ENST00000341485 NUFIP2Q7Z417 695 aaKnown RBP12.91□□□□□ -0.34
TPM3-208ENST00000341485 BOLLQ8N9W6 283 aaKnown RBP12.91□□□□□ -0.34
TPM3-208ENST00000341485 BPIFCQ8NFQ6 507 aa12.91□□□□□ -0.34
TPM3-208ENST00000341485 ABHD17AQ96GS6 310 aa12.91□□□□□ -0.34
TPM3-208ENST00000341485 TECTBQ96PL2 329 aa12.91□□□□□ -0.34
TPM3-208ENST00000341485 C12orf49Q9H741 205 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms