RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 LINC00310P59036 64 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 ADAM8P78325 824 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 IQCJQ1A5X6 159 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 C1QL3Q5VWW1 255 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 OR8G2PQ6IF36 304 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 ETFRF1Q6IPR1 90 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 SHISA5Q8N114 240 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 ZNF615Q8N8J6 731 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 LFNGQ8NES3 379 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 OR1L6Q8NGR2 347 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 OR13G1Q8NGZ3 307 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 KCNE4Q8WWG9 221 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 UBE2E3Q969T4 207 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 FGGYQ96C11 551 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 PBDC1Q9BVG4 233 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 PELI2Q9HAT8 420 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 KLHL28Q9NXS3 571 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 ZNF319Q9P2F9 582 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 IKZF2Q9UKS7 526 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 PPIAL4AQ9Y536 164 aa4.88□□□□□ -1.63
CSDE1-202ENST00000339438 GVINP1Q7Z2Y8 2422 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 ZFHX2Q9C0A1 2572 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-202ENST00000339438 DNHD1Q96M86 4753 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 GCN1Q92616 2671 aaKnown RBP4.87□□□□□ -1.63
CSDE1-202ENST00000339438 TRBV11-1A0A0K0K1C0 115 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 CDC14CA4D256 554 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 CYB5R3P00387 301 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-202ENST00000339438 PI3P19957 117 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 CD27P26842 260 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 PTGER4P35408 488 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 RPS27P42677 84 aaKnown RBP4.87□□□□□ -1.63
CSDE1-202ENST00000339438 POLR2HP52434 150 aaKnown RBP4.87□□□□□ -1.63
CSDE1-202ENST00000339438 H3F3AP84243 136 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 OR5I1Q13606 314 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 ACTL10Q5JWF8 245 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 ARMC6Q6NXE6 501 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 DPY19L2P2Q6ZN68 376 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 TIPARPQ7Z3E1 657 aaKnown RBP4.87□□□□□ -1.63
CSDE1-202ENST00000339438 ZAR1Q86SH2 424 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 MRPL41Q8IXM3 137 aaKnown RBP4.87□□□□□ -1.63
CSDE1-202ENST00000339438 C1orf87Q8N0U7 546 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 CSNK1A1LQ8N752 337 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 STPG4Q8N801 248 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 STT3BQ8TCJ2 826 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 TMEM170AQ8WVE7 144 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 LPAR4Q99677 370 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 WDR76Q9H967 626 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 KIAA1456Q9P272 454 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 TBC1D29Q9UFV1 150 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 RNF150Q9ULK6 438 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 LIPGQ9Y5X9 500 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 KIAA2026Q5HYC2 2103 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 XKRY2A2RUG3 117 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 XKRYO14609 159 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 TNFSF13O75888 250 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 NDUFB2O95178 105 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 PET100P0DJ07 73 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 TMEM225BP0DP42 221 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 GALNSP34059 522 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 CTRLP40313 264 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 OR3A2P47893 321 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 CAMLGP49069 296 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 RAB7AP51149 207 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 UCP3P55916 312 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 KLF3P57682 345 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-202ENST00000339438 PLAC9Q5JTB6 97 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 LEMD1Q68G75 181 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 ZNF880Q6PDB4 577 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 RNF144BQ7Z419 303 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 NRSN1Q8IZ57 195 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 Q8N976 141 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 GRHL3Q8TE85 626 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 DOK4Q8TEW6 326 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 ACY3Q96HD9 319 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 CSTL1Q9H114 145 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 CALHM2Q9HA72 323 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 TAS2R4Q9NYW5 299 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 FOXJ2Q9P0K8 574 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 LRIT1Q9P2V4 623 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 DKKL1Q9UK85 242 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 ASCC3Q8N3C0 2202 aaKnown RBP4.87□□□□□ -1.63
CSDE1-202ENST00000339438 LYSTQ99698 3801 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 NPIPA5A0A0B4J1W7 369 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 A0A1B0GWA3 101 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 PRSS38A1L453 326 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 TMEM238C9JI98 176 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 NPIPA7E9PJI5 369 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 LMX1BO60663 402 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 RAD51DO75771 328 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 NPIPA8P0DM63 369 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 HNRNPA2B1P22626 353 aaKnown RBP4.87□□□□□ -1.63
CSDE1-202ENST00000339438 FPR2P25090 351 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 HLA-DRB3P79483 266 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 LRRC69Q6ZNQ3 347 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 GCNT2Q8N0V5 402 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 C11orf42Q8N5U0 333 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 NUDT10Q8NFP7 164 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 OR6K6Q8NGW6 343 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 ORAOV1Q8WV07 137 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 C1orf147Q96MC9 270 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms