RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 TMEM241Q24JQ0 296 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 LAIR2Q6ISS4 152 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 RNF133Q8WVZ7 376 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 WFDC6Q9BQY6 131 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 TMPRSS5Q9H3S3 457 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 CA10Q9NS85 328 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 TRGV10A0A0A0MS01 117 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 BPIFB3P59826 476 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 ZXDAP98168 799 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 RNPS1Q15287 305 aaKnown RBP12.15□□□□□ -0.46
RTN4-202ENST00000337526 MICBQ29980 383 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 DGAT2L6Q6ZPD8 337 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 TMEM104Q8NE00 496 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 OCIAD1Q9NX40 245 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 ELF5Q9UKW6 265 aaPredicted RBP12.15□□□□□ -0.46
RTN4-202ENST00000337526 CD200P41217 278 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 FFAR4Q5NUL3 377 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 CBLN2Q8IUK8 224 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 POLR2AP24928 1970 aaKnown RBP12.15□□□□□ -0.46
RTN4-202ENST00000337526 A0A1W2PR80 420 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 FOXS1O43638 330 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 UBAC2Q8NBM4 344 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 TIMD4Q96H15 378 aa12.15□□□□□ -0.46
RTN4-202ENST00000337526 ZNF831Q5JPB2 1677 aa12.15□□□□□ -0.47
RTN4-202ENST00000337526 DSPPQ9NZW4 1301 aa12.15□□□□□ -0.47
RTN4-202ENST00000337526 COL24A1Q17RW2 1714 aa12.15□□□□□ -0.47
RTN4-202ENST00000337526 HSBP1O75506 76 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 HLA-DQB1P01920 261 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 ARL16Q0P5N6 197 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 ACY3Q96HD9 319 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 FAM210BQ96KR6 192 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 ALX4Q9H161 411 aaPredicted RBP12.14□□□□□ -0.47
RTN4-202ENST00000337526 LPAR3Q9UBY5 353 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 ZMIZ1Q9ULJ6 1067 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 SOX15O60248 233 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 BGLAPP02818 100 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 ARG1P05089 322 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 EPHA8P29322 1005 aaPredicted RBP12.14□□□□□ -0.47
RTN4-202ENST00000337526 CALCRP30988 508 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 C19orf57Q0VDD7 668 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 MGAT2Q10469 447 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 TUSC1Q2TAM9 212 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 SLC26A10Q8NG04 563 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 POM121L2Q96KW2 1035 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 MS4A7Q9GZW8 240 aaPredicted RBP12.14□□□□□ -0.47
RTN4-202ENST00000337526 ZNF835Q9Y2P0 537 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 POU2F2P09086 479 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 RAB5AP20339 215 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 LIMS1P48059 325 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 KRTDAPP60985 99 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 DEFB109BQ30KR1 87 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 ISOC2Q96AB3 205 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 WNT16Q9UBV4 365 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 ZDBF2Q9HCK1 2354 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 FCGR3BO75015 233 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 VDAC1P21796 283 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 ALKBH6Q3KRA9 238 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 MOGAT2Q3SYC2 334 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 SFTPA2Q8IWL1 248 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 OR2Z1Q8NG97 314 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 GPR27Q9NS67 375 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 PSG11Q9UQ72 335 aa12.14□□□□□ -0.47
RTN4-202ENST00000337526 RBFOX3A6NFN3 312 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 SPRY3O43610 288 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 ZNF205O95201 554 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 ANKRD34CP0C6C1 535 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 RFLNBQ8N5W9 214 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 AMDHD2Q9Y303 409 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 KIF13BQ9NQT8 1826 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 DEFB108AA8MXU0 73 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 COX7A2P2O60397 106 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 CYC1P08574 325 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 RPL11P62913 178 aaKnown RBP12.13□□□□□ -0.47
RTN4-202ENST00000337526 PRSS53Q2L4Q9 553 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 ZXDCQ2QGD7 858 aaPredicted RBP12.13□□□□□ -0.47
RTN4-202ENST00000337526 AWAT1Q58HT5 328 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 CD200R1LQ6Q8B3 271 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 OR5B21A6NL26 309 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 GEMIN2O14893 280 aaKnown RBP12.13□□□□□ -0.47
RTN4-202ENST00000337526 TOX3O15405 576 aaPredicted RBP12.13□□□□□ -0.47
RTN4-202ENST00000337526 SUMO1P63165 101 aaKnown RBP12.13□□□□□ -0.47
RTN4-202ENST00000337526 HLA-DRB3P79483 266 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 FUT5Q11128 374 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 IL24Q13007 206 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 OR2A2Q6IF42 318 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 D2HGDHQ8N465 521 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 OR4D10Q8NGI6 311 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 OR13G1Q8NGZ3 307 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 ADAT3Q96EY9 351 aaPredicted RBP12.13□□□□□ -0.47
RTN4-202ENST00000337526 CHRDL1Q9BU40 450 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 TRAPPC1Q9Y5R8 145 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 GREM1O60565 184 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 IGKV1D-16P01601 117 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 DAOP14920 347 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 CNN1P51911 297 aaKnown RBP12.13□□□□□ -0.47
RTN4-202ENST00000337526 MRPL24Q96A35 216 aaKnown RBP12.13□□□□□ -0.47
RTN4-202ENST00000337526 SARGQ9BW04 601 aa12.13□□□□□ -0.47
RTN4-202ENST00000337526 KLHDC2Q9Y2U9 406 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms