RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 STRAPQ9Y3F4 350 aaKnown RBP7.54□□□□□ -1.2
CLK1-201ENST00000321356 HS3ST3B1Q9Y662 390 aa7.54□□□□□ -1.2
CLK1-201ENST00000321356 CNTRLQ7Z7A1 2325 aa7.54□□□□□ -1.2
CLK1-201ENST00000321356 TNRC6BQ9UPQ9 1833 aaKnown RBP7.53□□□□□ -1.2
CLK1-201ENST00000321356 A0A1B0GW64 132 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 GJE1A6NN92 205 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 ZNF716A6NP11 495 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 G3V3Y1 287 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 ST8SIA3O43173 380 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 XRCC2O43543 280 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 NME2P1O60361 137 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 GDF9O60383 454 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 PDCD6O75340 191 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 CBR3O75828 277 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 NRASP01111 189 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 MT-ND4LP03901 98 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 LCATP04180 440 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 IGFBP4P22692 258 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 FUT6P51993 359 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 FXYD4P59646 89 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 PHLDA2Q53GA4 152 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 AWAT1Q58HT5 328 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 TRIM61Q5EBN2 209 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 SLC22A25Q6T423 547 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 CLEC9AQ6UXN8 241 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 ZFP82Q8N141 532 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 OR52M1Q8NGK5 317 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 OR4D5Q8NGN0 318 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 POM121Q96HA1 1249 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
CLK1-201ENST00000321356 SYT3Q9BQG1 590 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 PARP12Q9H0J9 701 aaKnown RBP7.53□□□□□ -1.2
CLK1-201ENST00000321356 RGCCQ9H4X1 137 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 IFT22Q9H7X7 185 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 CRLF2Q9HC73 371 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 C19orf12Q9NSK7 152 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 WNT16Q9UBV4 365 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 TMED3Q9Y3Q3 217 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 SDK2Q58EX2 2172 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 NSG1A0A0A6YYJ2 146 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 C7orf77A4D0Y5 90 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 C5orf52A6NGY3 159 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 ZNF32P17041 273 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 AGAP20933 346 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 HTR5AP47898 357 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 CXCL12P48061 93 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 FHITP49789 147 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 RBM11P57052 281 aaKnown RBP7.53□□□□□ -1.2
CLK1-201ENST00000321356 MLF1P58340 268 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 PSG4Q00888 419 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 TMEM211Q6ICI0 200 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 FBXW12Q6X9E4 464 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 Q6ZS49 121 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 GGNQ86UU5 652 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 TDHQ8IZJ6 230 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 CCDC71LQ8N9Z2 235 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 Q8NFD4 153 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 OR5L1Q8NGL2 311 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 OR11L1Q8NGX0 322 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 NAT6Q93015 286 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 WNT5BQ9H1J7 359 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 SH3BGRL3Q9H299 93 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 PLSCR2Q9NRY7 297 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 FBXO9Q9UK97 447 aaPredicted RBP7.53□□□□□ -1.2
CLK1-201ENST00000321356 ST3GAL6Q9Y274 331 aa7.53□□□□□ -1.2
CLK1-201ENST00000321356 RCL1Q9Y2P8 373 aaKnown RBP7.53□□□□□ -1.2
CLK1-201ENST00000321356 PTRH2Q9Y3E5 179 aaKnown RBP7.53□□□□□ -1.2
CLK1-201ENST00000321356 NCKAP5O14513 1909 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 FAM221AA4D161 298 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 K7N7A8 449 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 UBE2CO00762 179 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 EIF3GO75821 320 aaKnown RBP eCLIP7.52□□□□□ -1.21
CLK1-201ENST00000321356 CDS2O95674 445 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 ACAA1P09110 424 aaPredicted RBP7.52□□□□□ -1.21
CLK1-201ENST00000321356 B4GALT1P15291 398 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 ZNF44P15621 663 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 TCN2P20062 427 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 FUT3P21217 361 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 AADACP22760 399 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 SRD5A2P31213 254 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 AKR1C3P42330 323 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 GLP1RP43220 463 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 CAMLGP49069 296 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 PRSS12P56730 875 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 ZNF92Q03936 586 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 ZNF616Q08AN1 781 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 MALLQ13021 153 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 RIPPLY2Q5TAB7 128 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 ABLIM2Q6H8Q1 611 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 BRICD5Q6PL45 260 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 RPS19BP1Q86WX3 136 aaKnown RBP7.52□□□□□ -1.21
CLK1-201ENST00000321356 SLC35G3Q8N808 338 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 AGBL5Q8NDL9 886 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 AKR7LQ8NHP1 331 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 KCNE4Q8WWG9 221 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 SPSB4Q96A44 273 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 BOD1Q96IK1 185 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 JSRP1Q96MG2 331 aaPredicted RBP7.52□□□□□ -1.21
CLK1-201ENST00000321356 IP6K3Q96PC2 410 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 TECTBQ96PL2 329 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms