RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 C4orf45Q96LM5 186 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 NEURL2Q9BR09 285 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 GABARAPL1Q9H0R8 117 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 KCNIP2Q9NS61 270 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 LSM2Q9Y333 95 aaKnown RBP7.8□□□□□ -1.16
SSBP2-201ENST00000320672 SIRT4Q9Y6E7 314 aaPredicted RBP7.8□□□□□ -1.16
SSBP2-201ENST00000320672 MYH11P35749 1972 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 CTAG2O75638 210 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 IGFBP7Q16270 282 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 TEX261Q6UWH6 196 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 OR4P4Q8NGL7 312 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 NT5CQ8TCD5 201 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 ST8SIA1Q92185 356 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 FBXL17Q9UF56 701 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 COLQQ9Y215 455 aaPredicted RBP7.8□□□□□ -1.16
SSBP2-201ENST00000320672 U3KQ87 197 aa7.8□□□□□ -1.16
SSBP2-201ENST00000320672 HPP00738 406 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 CXCL10P02778 98 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 PEBP1P30086 187 aaKnown RBP7.79□□□□□ -1.16
SSBP2-201ENST00000320672 GALR1P47211 349 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 NHLH1Q02575 133 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 NHLH2Q02577 135 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 DHRS2Q13268 280 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 LYZL2Q7Z4W2 148 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 DOK1Q99704 481 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 PRRX2Q99811 253 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 PECRQ9BY49 303 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 FGF20Q9NP95 211 aaPredicted RBP7.79□□□□□ -1.16
SSBP2-201ENST00000320672 TAF1P21675 1872 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 ASCC3Q8N3C0 2202 aaKnown RBP7.79□□□□□ -1.16
SSBP2-201ENST00000320672 IGHV3OR16-8A0A075B7F1 116 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 LY6EQ16553 131 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 SLIRPQ9GZT3 109 aaKnown RBP7.79□□□□□ -1.16
SSBP2-201ENST00000320672 LHX9Q9NQ69 397 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 RHBDL1O75783 438 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 SRPXP78539 464 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 LYPD8Q6UX82 237 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 RTL10Q7L3V2 364 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 POM121L2Q96KW2 1035 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 IGHV3-66A0A0C4DH42 116 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 TMEM30CPA0ZSE6 113 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 SLC17A2O00624 439 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 SMAD7O15105 426 aaKnown RBP7.79□□□□□ -1.16
SSBP2-201ENST00000320672 CHST1O43916 411 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 ZNF737O75373 536 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 CALHM3Q86XJ0 350 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 GAPTQ8N292 157 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 ATP5SQ99766 215 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 BCL2L10Q9HD36 194 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 IL36GQ9NZH8 169 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 RABAC1Q9UI14 185 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 BCL2L11O43521 198 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 SULT1A1P50225 295 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 BTG1P62324 171 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 RNF24Q9Y225 148 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 MUC21A0A0G2JKD1 596 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 MUC21A0A140T8X8 626 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 HSBP1O75506 76 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 RUNX1Q01196 453 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 PMS2P11Q13670 270 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 MUC21Q5SSG8 566 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 H7C2G1 150 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 FBP1P09467 338 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 FA2HQ7L5A8 372 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 TMEM229BQ8NBD8 167 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 OR52L2PQ8NGH6 319 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 SLC25A40Q8TBP6 338 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 C19orf43Q9BQ61 176 aa7.79□□□□□ -1.16
SSBP2-201ENST00000320672 MYH6P13533 1939 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 JTBO76095 146 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 IGKV1D-16P01601 117 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 TFF1P04155 84 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 C19orf35Q6ZS72 473 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 ABHD14BQ96IU4 210 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 RASL10BQ96S79 203 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 IER2Q9BTL4 223 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 RNASE1P07998 156 aaKnown RBP7.78□□□□□ -1.16
SSBP2-201ENST00000320672 CNN1P51911 297 aaKnown RBP7.78□□□□□ -1.16
SSBP2-201ENST00000320672 FAHD2BQ6P2I3 314 aaPredicted RBP7.78□□□□□ -1.16
SSBP2-201ENST00000320672 LRRC75AQ8NAA5 344 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 TMEM174Q8WUU8 243 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 FAHD2AQ96GK7 314 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 MS4A10Q96PG2 267 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 PIGMQ9H3S5 423 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 LAMB4A4D0S4 1761 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 EPOPA6NHQ4 379 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 REG1AP05451 166 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 THBS4P35443 961 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 PPP1CCP36873 323 aaKnown RBP7.78□□□□□ -1.16
SSBP2-201ENST00000320672 B2MP61769 119 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 RPS23P62266 143 aaKnown RBP7.78□□□□□ -1.16
SSBP2-201ENST00000320672 OR10G4Q8NGN3 311 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 OR10G9Q8NGN4 311 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 OR10G7Q8NGN6 311 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 PTP4A1Q93096 173 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 SMIM17P0DL12 118 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 GNG3P63215 75 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 HSD17B13Q7Z5P4 300 aaPredicted RBP7.78□□□□□ -1.16
SSBP2-201ENST00000320672 GUCD1Q96NT3 240 aa7.78□□□□□ -1.16
SSBP2-201ENST00000320672 PSG6Q00889 435 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms